RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 NDUFA7O95182 113 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 HLA-AP01891 365 aaKnown RBP5.65□□□□□ -1.5
SPG11-224ENST00000561268 GYPAP02724 150 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 GAPDHP04406 335 aaKnown RBP5.65□□□□□ -1.5
SPG11-224ENST00000561268 PSMB6P28072 239 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 MFGE8Q08431 387 aaPredicted RBP5.65□□□□□ -1.5
SPG11-224ENST00000561268 PDCD1Q15116 288 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 TAF13Q15543 124 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 MICBQ29980 383 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 DEFB112Q30KQ8 113 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 SMUG1Q53HV7 270 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 RNASE12Q5GAN4 147 aaKnown RBP5.65□□□□□ -1.5
SPG11-224ENST00000561268 NKAPLQ5M9Q1 402 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 GPR157Q5UAW9 335 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 BRD3OSQ6XYD6 125 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 Q6YL49 198 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 ZDHHC23Q8IYP9 409 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 SVBPQ8N300 66 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 FGFRL1Q8N441 504 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 DTX3Q8N9I9 347 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 PNLDC1Q8NA58 520 aaKnown RBP5.65□□□□□ -1.5
SPG11-224ENST00000561268 SCCPDHQ8NBX0 429 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 CLRN3Q8NCR9 226 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 OR4D10Q8NGI6 311 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 OR8S1Q8NH09 359 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 SGMS2Q8NHU3 365 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 COQ8AQ8NI60 647 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 PPP1R1CQ8WVI7 109 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 WFDC12Q8WWY7 111 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 ST8SIA4Q92187 359 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 GCDHQ92947 438 aaPredicted RBP5.65□□□□□ -1.5
SPG11-224ENST00000561268 TNFRSF14Q92956 283 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 MARC2Q969Z3 335 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 WDR89Q96FK6 387 aaPredicted RBP5.65□□□□□ -1.5
SPG11-224ENST00000561268 PGAM5Q96HS1 289 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 GAFA1Q96PS6 74 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 MICU1Q9BPX6 476 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 DCTN5Q9BTE1 182 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 TM2D1Q9BX74 207 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 SEC11CQ9BY50 192 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 TTTY10Q9BZA0 68 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 MS4A7Q9GZW8 240 aaPredicted RBP5.65□□□□□ -1.5
SPG11-224ENST00000561268 FXYD6Q9H0Q3 95 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 SMDT1Q9H4I9 107 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 TAS2R4Q9NYW5 299 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 GPR132Q9UNW8 380 aa5.65□□□□□ -1.5
SPG11-224ENST00000561268 SOX21Q9Y651 276 aaPredicted RBP5.65□□□□□ -1.5
SPG11-224ENST00000561268 IGKV1D-17A0A075B6S4 117 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 IGHV1-69DA0A0B4J2H0 117 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 FAM25EA8MYX2 175 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 PSMD9O00233 223 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 MFNGO00587 321 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 MTRF1O75570 445 aaKnown RBP5.64□□□□□ -1.51
SPG11-224ENST00000561268 ATG12O94817 140 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 TOX4O94842 621 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 KDM4BO94953 1096 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 IGHV1-69P01742 117 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 IFNA6P05013 189 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 GRPP07492 148 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 SELLP14151 372 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 HIST1H1DP16402 221 aaKnown RBP5.64□□□□□ -1.51
SPG11-224ENST00000561268 ZNF93P35789 620 aaPredicted RBP5.64□□□□□ -1.51
SPG11-224ENST00000561268 GNALP38405 381 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 GNG3P63215 75 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 HMGN3Q15651 99 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 CDNFQ49AH0 187 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 RUSC1-AS1Q66K80 236 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 ELP2Q6IA86 826 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 PRSS54Q6PEW0 395 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 SHISA2Q6UWI4 295 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 RBMS3Q6XE24 437 aaKnown RBP5.64□□□□□ -1.51
SPG11-224ENST00000561268 C1orf122Q6ZSJ8 110 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 JAGN1Q8N5M9 183 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 FAM216BQ8N7L0 139 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 Q8N7P7 452 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 OR5AP2Q8NGF4 316 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 OR4D6Q8NGJ1 314 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 OR52B4Q8NGK2 314 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 OR10K1Q8NGX5 313 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 EMG1Q92979 244 aaKnown RBP5.64□□□□□ -1.51
SPG11-224ENST00000561268 ARL11Q969Q4 196 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 MRPS24Q96EL2 167 aaKnown RBP5.64□□□□□ -1.51
SPG11-224ENST00000561268 SDSLQ96GA7 329 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 LINC00052Q96N35 136 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 TINAGL1Q9GZM7 467 aaPredicted RBP5.64□□□□□ -1.51
SPG11-224ENST00000561268 CHST6Q9GZX3 395 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 PBOV1Q9GZY1 135 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 WDR13Q9H1Z4 485 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 HIPK2Q9H2X6 1198 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 OR51I2Q9H344 312 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 CNTD2Q9H8S5 307 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 BEX1Q9HBH7 125 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 HES4Q9HCC6 221 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 IFT46Q9NQC8 304 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 PCDHB16Q9NRJ7 776 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 ZNRD1Q9P1U0 126 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 HSF4Q9ULV5 492 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 PRELID1Q9Y255 219 aa5.64□□□□□ -1.51
SPG11-224ENST00000561268 TMA7Q9Y2S6 64 aaKnown RBP5.64□□□□□ -1.51
SPG11-224ENST00000561268 V9GYS6 101 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms