RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 C9orf64Q5T6V5 341 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 GLT8D1Q68CQ7 371 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 NANOGP8Q6NSW7 305 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 SFXN4Q6P4A7 337 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 ZNF613Q6PF04 617 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 GOLT1AQ6ZVE7 132 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 VN1R4Q7Z5H5 301 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 BAP18Q8IXM2 172 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 IFT20Q8IY31 132 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 ORMDL3Q8N138 153 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 ZNF567Q8N184 647 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 DEFB125Q8N687 156 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 ZNF645Q8N7E2 425 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 ZNF676Q8N7Q3 588 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 POM121L12Q8N7R1 296 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 GDPD1Q8N9F7 314 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 DCAF4L2Q8NA75 395 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 NPBQ8NG41 125 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 OR8A1Q8NGG7 326 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 OR2T27Q8NH04 317 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 OR1L1Q8NH94 360 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 ZNRF2Q8NHG8 242 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 LHFPL5Q8TAF8 219 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 DNAJC9Q8WXX5 260 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 RMI2Q96E14 147 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 C16orf74Q96GX8 76 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 OR2M2Q96R28 347 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 NMNAT3Q96T66 252 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 LITAFQ99732 161 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 TBL1YQ9BQ87 522 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 TMEM147Q9BVK8 224 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 GGTLC1Q9BX51 225 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 RSPO3Q9BXY4 272 aaPredicted RBP1.52□□□□□ -2.17
RTF1-207ENST00000561076 GNB1LQ9BYB4 327 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 SLC17A9Q9BYT1 436 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 ZNF436Q9C0F3 470 aaPredicted RBP1.52□□□□□ -2.17
RTF1-207ENST00000561076 GTSF1LQ9H1H1 148 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 MED28Q9H204 178 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 ABCG5Q9H222 651 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 VCXQ9H320 206 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 ZNF696Q9H7X3 374 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 ZNF702PQ9H963 129 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 ZNF331Q9NQX6 463 aaPredicted RBP1.52□□□□□ -2.17
RTF1-207ENST00000561076 ACER3Q9NUN7 267 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 UQCC1Q9NVA1 299 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 TAS2R1Q9NYW7 299 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 IDI2-AS1Q9NZ38 188 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 MED11Q9P086 117 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 DHCR7Q9UBM7 475 aaKnown RBP1.52□□□□□ -2.17
RTF1-207ENST00000561076 SS18L2Q9UHA2 77 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 LAMTOR3Q9UHA4 124 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 NEU3Q9UQ49 428 aa1.52□□□□□ -2.17
RTF1-207ENST00000561076 KLF13Q9Y2Y9 288 aaPredicted RBP1.52□□□□□ -2.17
RTF1-207ENST00000561076 ZNF706Q9Y5V0 76 aaPredicted RBP1.52□□□□□ -2.17
RTF1-207ENST00000561076 MTCL1Q9Y4B5 1905 aaKnown RBP1.52□□□□□ -2.17
RTF1-207ENST00000561076 CAMTA1Q9Y6Y1 1673 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 SYNMO15061 1565 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 MAGI3Q5TCQ9 1506 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 ABCA10Q8WWZ4 1543 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 NPATQ14207 1427 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 PTPRKQ15262 1439 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 DOCK7Q96N67 2140 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 IGKV1-27A0A075B6S5 117 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 A0A087X002 238 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 IGHV1OR15-9A0A0B4J2B8 117 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 IGHV5-51A0A0C4DH38 117 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 TMEM72A0PK05 275 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 TRAPPC13A5PLN9 417 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 A6NDX4 124 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 OR4C45A6NMZ5 311 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 BTNL10A8MVZ5 291 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.51□□□□□ -2.17
RTF1-207ENST00000561076 J3QRK9 145 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 UPK1AO00322 258 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 BET1O15155 118 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 ARPC5O15511 151 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 CD5LO43866 347 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 ORC5O43913 435 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 CST8O60676 142 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 BANF1O75531 89 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 MED6O75586 246 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 POP7O75817 140 aaKnown RBP1.51□□□□□ -2.17
RTF1-207ENST00000561076 EPPINO95925 133 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 FAM107AO95990 144 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 PDYNP01213 254 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 GYPCP04921 128 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 IGHV4-34P06331 123 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 C8GP07360 202 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 RBP1P09455 135 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 NBEAP1P0C6P0 100 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 ZNF705DP0CH99 300 aaPredicted RBP1.51□□□□□ -2.17
RTF1-207ENST00000561076 FGF6P10767 208 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 SPI1P17947 270 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 PPIBP23284 216 aaKnown RBP1.51□□□□□ -2.17
RTF1-207ENST00000561076 ATP6V0CP27449 155 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 PSMD8P48556 350 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 SERPINB10P48595 397 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 TAF6P49848 677 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 MEOX2P50222 304 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 LHX2P50458 406 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms