RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 DUX4L5P0CJ88 424 aa14.19□□□□□ -0.14
HDDC3-206ENST00000561036 DUX4L6P0CJ89 424 aa14.19□□□□□ -0.14
HDDC3-206ENST00000561036 DUX4L7P0CJ90 424 aa14.19□□□□□ -0.14
HDDC3-206ENST00000561036 RPA2P15927 270 aa14.19□□□□□ -0.14
HDDC3-206ENST00000561036 PPP1CCP36873 323 aaKnown RBP14.19□□□□□ -0.14
HDDC3-206ENST00000561036 IFITM2Q01629 132 aa14.19□□□□□ -0.14
HDDC3-206ENST00000561036 GNMTQ14749 295 aa14.19□□□□□ -0.14
HDDC3-206ENST00000561036 C17orf58Q2M2W7 97 aa14.19□□□□□ -0.14
HDDC3-206ENST00000561036 DUX4L9Q6RFH8 374 aaPredicted RBP14.19□□□□□ -0.14
HDDC3-206ENST00000561036 DRAM1Q8N682 238 aa14.19□□□□□ -0.14
HDDC3-206ENST00000561036 OR10A7Q8NGE5 316 aa14.19□□□□□ -0.14
HDDC3-206ENST00000561036 OR52M1Q8NGK5 317 aa14.19□□□□□ -0.14
HDDC3-206ENST00000561036 RFESDQ8TAC1 157 aa14.19□□□□□ -0.14
HDDC3-206ENST00000561036 OR10C1Q96KK4 312 aa14.19□□□□□ -0.14
HDDC3-206ENST00000561036 PARP12Q9H0J9 701 aaKnown RBP14.19□□□□□ -0.14
HDDC3-206ENST00000561036 LIN7CQ9NUP9 197 aaKnown RBP14.19□□□□□ -0.14
HDDC3-206ENST00000561036 GNG12Q9UBI6 72 aa14.19□□□□□ -0.14
HDDC3-206ENST00000561036 DUX4Q9UBX2 424 aa14.19□□□□□ -0.14
HDDC3-206ENST00000561036 KLF2Q9Y5W3 355 aaPredicted RBP14.19□□□□□ -0.14
HDDC3-206ENST00000561036 RAI1Q7Z5J4 1906 aaPredicted RBP14.18□□□□□ -0.14
HDDC3-206ENST00000561036 L7N2F9 121 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 RP2O75695 350 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 SOD3P08294 240 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 PET100P0DJ07 73 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 NDUFB7P17568 137 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 COL8A2P25067 703 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 LOXL3P58215 753 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 IAH1Q2TAA2 248 aaPredicted RBP14.18□□□□□ -0.14
HDDC3-206ENST00000561036 MORN2Q502X0 79 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 TMEM268Q5VZI3 342 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 LYZL2Q7Z4W2 148 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 ZNF546Q86UE3 836 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 ZNF695Q8IW36 515 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 SELENOHQ8IZQ5 122 aaKnown RBP14.18□□□□□ -0.14
HDDC3-206ENST00000561036 TCTEX1D1Q8N7M0 179 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 PLEKHF2Q9H8W4 249 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 FAM212BQ9NTI7 297 aaPredicted RBP14.18□□□□□ -0.14
HDDC3-206ENST00000561036 ZFP57Q9NU63 452 aa14.18□□□□□ -0.14
HDDC3-206ENST00000561036 MPTX1A8MV57 137 aa14.17□□□□□ -0.14
HDDC3-206ENST00000561036 IGHV2-70P01814 119 aa14.17□□□□□ -0.14
HDDC3-206ENST00000561036 LYL1P12980 280 aa14.17□□□□□ -0.14
HDDC3-206ENST00000561036 CXCL2P19875 107 aa14.17□□□□□ -0.14
HDDC3-206ENST00000561036 MEX3BQ6ZN04 569 aaKnown RBP14.17□□□□□ -0.14
HDDC3-206ENST00000561036 LHFPL5Q8TAF8 219 aa14.17□□□□□ -0.14
HDDC3-206ENST00000561036 RBPMSQ93062 196 aaKnown RBP14.17□□□□□ -0.14
HDDC3-206ENST00000561036 SPIN2AQ99865 258 aa14.17□□□□□ -0.14
HDDC3-206ENST00000561036 SPIN2BQ9BPZ2 258 aa14.17□□□□□ -0.14
HDDC3-206ENST00000561036 OR2D2Q9H210 308 aa14.17□□□□□ -0.14
HDDC3-206ENST00000561036 GAL3ST2Q9H3Q3 398 aa14.17□□□□□ -0.14
HDDC3-206ENST00000561036 GFOD1Q9NXC2 390 aa14.17□□□□□ -0.14
HDDC3-206ENST00000561036 IDI2-AS1Q9NZ38 188 aa14.17□□□□□ -0.14
HDDC3-206ENST00000561036 PAIP2BQ9ULR5 123 aaKnown RBP14.17□□□□□ -0.14
HDDC3-206ENST00000561036 GAB2Q9UQC2 676 aa14.17□□□□□ -0.14
HDDC3-206ENST00000561036 USP24Q9UPU5 2620 aa14.17□□□□□ -0.14
HDDC3-206ENST00000561036 NBEAQ8NFP9 2946 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 A0A0D9SG52 128 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 GPR37O15354 613 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 ARPC5O15511 151 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 TNFSF12O43508 249 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 SERPINE2P07093 398 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 RAB7AP51149 207 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 RPL31P62899 125 aaKnown RBP14.16□□□□□ -0.14
HDDC3-206ENST00000561036 EIF4EBP1Q13541 118 aaPredicted RBP14.16□□□□□ -0.14
HDDC3-206ENST00000561036 PRSS54Q6PEW0 395 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 LYPD2Q6UXB3 125 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 ZNF66Q6ZN08 573 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 TCF23Q7RTU1 214 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 SLC35G3Q8N808 338 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 AGMATQ9BSE5 352 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 TNFSF18Q9UNG2 199 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 CACNA1BQ00975 2339 aa14.16□□□□□ -0.14
HDDC3-206ENST00000561036 KIAA2026Q5HYC2 2103 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 TRBV23-1A0A0A0MS06 115 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 IGHV3-43A0A0B4J1X8 118 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 A0A1W2PPR1 153 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 DVL1O14640 695 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 OR2F2O95006 317 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 PRB1P04280 392 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 IGHV3-43DP0DP04 118 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 VDAC1P21796 283 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 CATR1Q13166 79 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 OR2F1Q13607 317 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 ZNF345Q14585 488 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 Q3ZCU0 254 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 LRRC37A5PQ49AS3 106 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 OR51H1Q8NH63 302 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 RAB1CQ92928 201 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 TIMD4Q96H15 378 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 HSD17B10Q99714 261 aaKnown RBP14.15□□□□□ -0.14
HDDC3-206ENST00000561036 SPOCK3Q9BQ16 436 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 RNF126Q9BV68 326 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 MFFQ9GZY8 342 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 GSKIPQ9P0R6 139 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 RNF150Q9ULK6 438 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 PSG11Q9UQ72 335 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 ROS1P08922 2347 aa14.15□□□□□ -0.14
HDDC3-206ENST00000561036 CLEC18AA5D8T8 446 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 C1QL1O75973 258 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 SLC25A6P12236 298 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 DAOP14920 347 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms