RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 HNRNPA3P51991 378 aaKnown RBP11.69□□□□□ -0.54
TRAF3-208ENST00000560371 STARD4Q96DR4 205 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 CYB5R1Q9UHQ9 305 aa11.69□□□□□ -0.54
TRAF3-208ENST00000560371 A0A1W2PPE3 182 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 ORM1P02763 201 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 HIST1H1EP10412 219 aaKnown RBP11.68□□□□□ -0.54
TRAF3-208ENST00000560371 GFRA1P56159 465 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 PSG5Q15238 335 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 FAM222BQ8WU58 562 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 MED19A0JLT2 244 aaPredicted RBP11.68□□□□□ -0.54
TRAF3-208ENST00000560371 SCGB1A1P11684 91 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 MC5RP33032 325 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 MPV17P39210 176 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 ANGPTL6Q8NI99 470 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 P2RX4Q99571 388 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 NPAS1Q99742 590 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 TIAF1O95411 115 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 UQCC3Q6UW78 93 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 MARS2Q96GW9 593 aaKnown RBP11.68□□□□□ -0.54
TRAF3-208ENST00000560371 SFTA3P0C7M3 94 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 FAM87AP0C7U9 286 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 CAMPP49913 170 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 DYRK2Q92630 601 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 DPH3P1Q9H4G8 78 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 ZNF646O15015 1829 aaPredicted RBP11.68□□□□□ -0.54
TRAF3-208ENST00000560371 A0A1W2PR77 199 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 WISP3O95389 354 aaPredicted RBP11.68□□□□□ -0.54
TRAF3-208ENST00000560371 FGF12P61328 243 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 FOXJ2Q9P0K8 574 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 ZNF107Q9UII5 783 aaPredicted RBP11.68□□□□□ -0.54
TRAF3-208ENST00000560371 CLEC18BQ6UXF7 455 aa11.68□□□□□ -0.54
TRAF3-208ENST00000560371 VSIG8P0DPA2 414 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 ID1P41134 155 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 PCOLCEQ15113 449 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 OR4P4Q8NGL7 312 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 PHOX2AO14813 284 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 ZNF66Q6ZN08 573 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 SPSB2Q99619 263 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 MANBALQ9NQG1 85 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 TTRP02766 147 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 HPXP02790 462 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 PMCHP20382 165 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 MUC15Q8N387 334 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 PLXND1Q9Y4D7 1925 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 A0A1B0GU03 582 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 SYNGR3O43761 229 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 LTBRP36941 435 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 ZNF426Q9BUY5 554 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 NIT2Q9NQR4 276 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 OR51B2Q9Y5P1 312 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 NACAE9PAV3 2078 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 OR2T8A6NH00 312 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 SMPD2O60906 423 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 OR5AL1P0C617 328 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 ZNF561Q8N587 486 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 OR1K1Q8NGR3 316 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 MIOXQ9UGB7 285 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 A1L4Q6 167 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 TMEM229AB2RXF0 380 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 COL8A1P27658 744 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 TEPPQ6URK8 271 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 SEZ6L2Q6UXD5 910 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 STXBP6Q8NFX7 210 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 GPA33Q99795 319 aa11.67□□□□□ -0.54
TRAF3-208ENST00000560371 FOXD3Q9UJU5 478 aaPredicted RBP11.67□□□□□ -0.54
TRAF3-208ENST00000560371 PTP4A3O75365 173 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 C10orf113Q5VZT2 155 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 OR8G5Q8NG78 346 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 PRR13Q9NZ81 148 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 HBZP02008 142 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 FABP4P15090 132 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 TMEM37Q8WXS4 190 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 SCARF2Q96GP6 870 aaPredicted RBP11.66□□□□□ -0.54
TRAF3-208ENST00000560371 KLF9Q13886 244 aaPredicted RBP11.66□□□□□ -0.54
TRAF3-208ENST00000560371 KLHDC1Q8N7A1 406 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 PRSS27Q9BQR3 290 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 OR4A5Q8NH83 315 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 SCNM1Q9BWG6 230 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 WASHC3Q9Y3C0 194 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 IGHV3-21A0A0B4J1V1 117 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 PSG2P11465 335 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 HDHD3Q9BSH5 251 aaPredicted RBP11.66□□□□□ -0.54
TRAF3-208ENST00000560371 P2RY1P47900 373 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 FDX2Q6P4F2 183 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 CLEC9AQ6UXN8 241 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 ZNF826PQ6ZT77 177 aa11.66□□□□□ -0.54
TRAF3-208ENST00000560371 SULT1A1P50225 295 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 PDLIM4P50479 330 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 RNASEKQ6P5S7 137 aaKnown RBP11.65□□□□□ -0.54
TRAF3-208ENST00000560371 ZPLD1Q8TCW7 415 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 ABHD14BQ96IU4 210 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 ZNF552Q9H707 407 aaPredicted RBP11.65□□□□□ -0.54
TRAF3-208ENST00000560371 IGHV3-72A0A0B4J1Y9 119 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 FCN1O00602 326 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 KCNAB3O43448 404 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 CTSBP07858 339 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 KIAA1324LA8MWY0 1029 aaPredicted RBP11.65□□□□□ -0.54
TRAF3-208ENST00000560371 ARF6P62330 175 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 HIST1H3AP68431 136 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 IL19Q9UHD0 177 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms