RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 OR10G6Q8NH81 332 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 CMTM2Q8TAZ6 248 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 PLPPR1Q8TBJ4 325 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF524Q96C55 264 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 PGAM5Q96HS1 289 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 SLC35E1Q96K37 410 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 SPACA5Q96QH8 159 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 TP53RKQ96S44 253 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 TXNDC17Q9BRA2 123 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 VAMP8Q9BV40 100 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 LIME1Q9H400 295 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF665Q9H7R5 613 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 DNAJC4Q9NNZ3 241 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 TMEM9BQ9NQ34 198 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 RPRMQ9NS64 109 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF391Q9UJN7 358 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 POLR1DQ9Y2S0 133 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 UBE2J1Q9Y385 318 aaPredicted RBP5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 RNF115Q9Y4L5 304 aa5.08□□□□□ -1.6
SNRPA1-209ENST00000560307 THADAQ6YHU6 1953 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 SAA2-SAA4A0A096LPE2 208 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 IGKV3D-11A0A0A0MRZ8 115 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 IGKV1D-43A0A0B4J1Z2 117 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 CTXND1A0A1B0GTU2 59 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 LOC102725191A0A1B0GVB3 256 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 C20orf202A1L168 122 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 FAM90A26D6RGX4 464 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 F6UZH7 168 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 HS3ST1O14792 307 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 ADAM20O43506 726 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 PDCD6O75340 191 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF737O75373 536 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 KLF8O95600 359 aaPredicted RBP5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 PPYP01298 95 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 GYPAP02724 150 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 SERPINA7P05543 415 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 FCGR2AP12318 317 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 HLA-DOBP13765 273 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 PVRP15151 417 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 DRD1P21728 446 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 HNRNPA2B1P22626 353 aaKnown RBP5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 FKBP2P26885 142 aaKnown RBP5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 IL3RAP26951 378 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 CHRNB4P30926 498 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 OTX1P32242 354 aaPredicted RBP5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 PAX9P55771 341 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 BIDP55957 195 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 RPL19P84098 196 aaKnown RBP5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 POU3F1Q03052 451 aaPredicted RBP5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 TLE3Q04726 772 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 PLCXD2Q0VAA5 305 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 Q0VG73 95 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF726P1Q15940 193 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 HIST3H3Q16695 136 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 ATP6V1FQ16864 119 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 PHLDA2Q53GA4 152 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 OTPQ5XKR4 325 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 C16orf54Q6UWD8 224 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 FAM57BQ71RH2 274 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 SMIM15Q7Z3B0 74 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 RNF144BQ7Z419 303 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 C6orf201Q7Z4U5 140 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 C1QL2Q7Z5L3 287 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 RABEPKQ7Z6M1 372 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 UEVLDQ8IX04 471 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 C20orf196Q8IYI0 205 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 C11orf42Q8N5U0 333 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF525Q8N782 197 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF441Q8N8Z8 693 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 OR5B3Q8NH48 314 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 ZNF721Q8TF20 911 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 RNF138Q8WVD3 245 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 LSM10Q969L4 123 aaKnown RBP5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 RNF125Q96EQ8 232 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 ADOQ96SZ5 270 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 WWTR1Q9GZV5 400 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 PARLQ9H300 379 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 HRASLS2Q9NWW9 162 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 UQCR10Q9UDW1 63 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 NXT1Q9UKK6 140 aaKnown RBP5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 WIPI2Q9Y4P8 454 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 EXPH5Q8NEV8 1989 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 PTPRSQ13332 1948 aa5.07□□□□□ -1.6
SNRPA1-209ENST00000560307 FREM3P0C091 2139 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 MED19A0JLT2 244 aaPredicted RBP5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 PGPEP1LA6NFU8 196 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 LRRC3CA6NJW4 275 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 LIPT2A6NK58 231 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 A6NNC1 897 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 A8MXE2 369 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 KLK10O43240 276 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 TCF21O43680 179 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 TLX3O43711 291 aaPredicted RBP5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 PDE6DO43924 150 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 ONECUT2O95948 504 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 NRASP01111 189 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 KRASP01116 189 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 MMP7P09237 267 aaPredicted RBP5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 BMP5P22003 454 aa5.06□□□□□ -1.6
SNRPA1-209ENST00000560307 TUBG1P23258 451 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms