RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 A0A1B0GU03 582 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 WRBO00258 174 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 OR8U9P0C7N5 309 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 MZT1Q08AG7 82 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 ZNF266Q14584 549 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 C1orf185Q5T7R7 199 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 HSD17B11Q8NBQ5 300 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 OR8U1Q8NH10 309 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 GPR146Q96CH1 333 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 SEC11CQ9BY50 192 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 PARP12Q9H0J9 701 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 SH3BGRL3Q9H299 93 aa12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 LIN7CQ9NUP9 197 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-212ENST00000559974 OOEPA6NGQ2 149 aa12.15□□□□□ -0.46
RABGGTA-212ENST00000559974 DNASE2O00115 360 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-212ENST00000559974 NUPL2O15504 423 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-212ENST00000559974 CRYABP02511 175 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-212ENST00000559974 EPHA1P21709 976 aa12.15□□□□□ -0.46
RABGGTA-212ENST00000559974 ASCL1P50553 236 aa12.15□□□□□ -0.46
RABGGTA-212ENST00000559974 RAB5CP51148 216 aa12.15□□□□□ -0.46
RABGGTA-212ENST00000559974 HOXA4Q00056 320 aaPredicted RBP12.15□□□□□ -0.46
RABGGTA-212ENST00000559974 GUCA2BQ16661 112 aa12.15□□□□□ -0.46
RABGGTA-212ENST00000559974 SMIM21Q3B7S5 101 aa12.15□□□□□ -0.46
RABGGTA-212ENST00000559974 RNASE11Q8TAA1 199 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-212ENST00000559974 LSM10Q969L4 123 aaKnown RBP12.15□□□□□ -0.46
RABGGTA-212ENST00000559974 GALMQ96C23 342 aa12.15□□□□□ -0.46
RABGGTA-212ENST00000559974 RNF115Q9Y4L5 304 aa12.15□□□□□ -0.46
RABGGTA-212ENST00000559974 DIDO1Q9BTC0 2240 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 C12orf77C9JDV5 145 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 RNASEK-C17orf49H0YIS7 233 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 IFNL4K9M1U5 179 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 AGPAT2O15120 278 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 CHST1O43916 411 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 NXPH3O95157 252 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 PTBP3O95758 552 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 TMEM50AO95807 157 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 IGKV1-39P01597 117 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 IGKV1D-39P04432 117 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 CD5P06127 495 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 OMGP23515 440 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 OR3A1P47881 315 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 BAXQ07812 192 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 AESQ08117 197 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 CLINT1Q14677 625 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 TIMM23BQ5SRD1 257 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 ZNF474Q6S9Z5 364 aaPredicted RBP12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 PUSL1Q8N0Z8 303 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 RPRMLQ8N4K4 120 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 DRAM1Q8N682 238 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 OR1L1Q8NH94 360 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 S100PBPQ96BU1 408 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 COQ2Q96H96 371 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 CACFD1Q9UGQ2 172 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 STRAPQ9Y3F4 350 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 COL12A1Q99715 3063 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 CADP27708 2225 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 CD200P41217 278 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 CAMLGP49069 296 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 ZNF83P51522 516 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 ODF3L1Q8IXM7 274 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 TMEM171Q8WVE6 324 aa12.14□□□□□ -0.47
RABGGTA-212ENST00000559974 USF3Q68DE3 2245 aa12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 FAM74A7A6NL05 159 aa12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 RNF212BA8MTL3 300 aa12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 ATXN7O15265 892 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 TSPAN15O95858 294 aa12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 ZNF16P17020 682 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 IL2RGP31785 369 aa12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 TIMP3P35625 211 aa12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 GABRA2P47869 451 aa12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 DVL1P1P54792 670 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 COL10A1Q03692 680 aa12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 ZNF616Q08AN1 781 aa12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 FAM74A3Q4VXF1 159 aa12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 MIDNQ504T8 468 aa12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 OR2Z1Q8NG97 314 aa12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 OR5C1Q8NGR4 320 aa12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 C19orf12Q9NSK7 152 aa12.13□□□□□ -0.47
RABGGTA-212ENST00000559974 KIAA1324LA8MWY0 1029 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 M0R1B8 84 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 CST7O76096 145 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 HBZP02008 142 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 PRH1P02810 166 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 TFF1P04155 84 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 ATF4P18848 351 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 CD80P33681 288 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 DYNLT3P51808 116 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 PAX9P55771 341 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 MSMPQ1L6U9 139 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 C3orf36Q3SXR2 165 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 ZNF585BQ52M93 769 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 Q6ZRM9 215 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 COMMD1Q8N668 190 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 ZNF645Q8N7E2 425 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 ZBTB34Q8NCN2 500 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 LRRC29Q8WV35 223 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 TOLLIPQ9H0E2 274 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 CACNG5Q9UF02 275 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 METRNQ9UJH8 293 aa12.12□□□□□ -0.47
RABGGTA-212ENST00000559974 C1QL1O75973 258 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms