RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 SRRQ9GZT4 340 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 AKIP1Q9NQ31 210 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 RDH8Q9NYR8 311 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 CDC42EP3Q9UKI2 254 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 ANAPC10Q9UM13 185 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 FAM96BQ9Y3D0 163 aa11.69□□□□□ -0.54
SMAD6-204ENST00000559931 RBM7Q9Y580 266 aaKnown RBP11.69□□□□□ -0.54
SMAD6-204ENST00000559931 NIPBLQ6KC79 2804 aaeCLIP11.69□□□□□ -0.54
SMAD6-204ENST00000559931 A0A087X0M5 115 aa11.68□□□□□ -0.54
SMAD6-204ENST00000559931 A0A1B0GX30 115 aa11.68□□□□□ -0.54
SMAD6-204ENST00000559931 J3QRK9 145 aa11.68□□□□□ -0.54
SMAD6-204ENST00000559931 LANCL1O43813 399 aa11.68□□□□□ -0.54
SMAD6-204ENST00000559931 OR5H8P0DN80 308 aa11.68□□□□□ -0.54
SMAD6-204ENST00000559931 NFYAP23511 347 aaPredicted RBP11.68□□□□□ -0.54
SMAD6-204ENST00000559931 CD34P28906 385 aa11.68□□□□□ -0.54
SMAD6-204ENST00000559931 HRH1P35367 487 aa11.68□□□□□ -0.54
SMAD6-204ENST00000559931 TAS2R19P59542 299 aa11.68□□□□□ -0.54
SMAD6-204ENST00000559931 ACTBL2Q562R1 376 aa11.68□□□□□ -0.54
SMAD6-204ENST00000559931 TRIQKQ629K1 86 aa11.68□□□□□ -0.54
SMAD6-204ENST00000559931 ZNF57Q68EA5 555 aaPredicted RBP11.68□□□□□ -0.54
SMAD6-204ENST00000559931 MFSD4AQ8N468 514 aa11.68□□□□□ -0.54
SMAD6-204ENST00000559931 TMEM229BQ8NBD8 167 aa11.68□□□□□ -0.54
SMAD6-204ENST00000559931 EDARADDQ8WWZ3 215 aa11.68□□□□□ -0.54
SMAD6-204ENST00000559931 WDR12Q9GZL7 423 aaKnown RBP11.68□□□□□ -0.54
SMAD6-204ENST00000559931 AMMECR1Q9Y4X0 333 aaPredicted RBP11.68□□□□□ -0.54
SMAD6-204ENST00000559931 M0QYG6 137 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 DIRAS3O95661 229 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 RAB3DO95716 219 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 CD3DP04234 171 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 EPHA1P21709 976 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 HTR1DP28221 377 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 FCGR2CP31995 323 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 SAA4P35542 130 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 AP3S2P59780 193 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 BPIFB3P59826 476 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 MIDNQ504T8 468 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 RNASE10Q5GAN6 216 aaKnown RBP11.67□□□□□ -0.54
SMAD6-204ENST00000559931 CT45A1Q5HYN5 189 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 ZNF626Q68DY1 528 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 TOMM5Q8N4H5 51 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 BEND2Q8NDZ0 799 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 CT45A3Q8NHU0 189 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 C22orf15Q8WYQ4 148 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 CREB3L1Q96BA8 519 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 ABHD14AQ9BUJ0 271 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 C11orf54Q9H0W9 315 aaPredicted RBP11.67□□□□□ -0.54
SMAD6-204ENST00000559931 MMP28Q9H239 520 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 ZNRD1Q9P1U0 126 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 RNF150Q9ULK6 438 aa11.67□□□□□ -0.54
SMAD6-204ENST00000559931 RBMX2Q9Y388 322 aaKnown RBP11.67□□□□□ -0.54
SMAD6-204ENST00000559931 LEUTXA8MZ59 168 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 SLC31A2O15432 143 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 ST8SIA5O15466 376 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 OR8U9P0C7N5 309 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 AKAIN1P0CW23 69 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 SRD5A1P18405 259 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 IL3RAP26951 378 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 CEACAM3P40198 252 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 RAB7AP51149 207 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 ZNF134P52741 427 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 PPP5CP53041 499 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 SCGB2A2Q13296 93 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 DYRK1AQ13627 763 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 HLA-DRB5Q30154 266 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 Q3ZCU0 254 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 STEAP1BQ6NZ63 245 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 LHFPL4Q7Z7J7 247 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 TMEM17Q86X19 198 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 H1FOOQ8IZA3 346 aaPredicted RBP11.66□□□□□ -0.54
SMAD6-204ENST00000559931 LYG1Q8N1E2 194 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 PIP4P2Q8N4L2 257 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 C8orf31Q8N9H6 132 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 OR6F1Q8NGZ6 308 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 OR8U1Q8NH10 309 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 PARP12Q9H0J9 701 aaKnown RBP11.66□□□□□ -0.54
SMAD6-204ENST00000559931 DPM3Q9P2X0 92 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 ZNF107Q9UII5 783 aaPredicted RBP11.66□□□□□ -0.54
SMAD6-204ENST00000559931 ZNF221Q9UK13 617 aa11.66□□□□□ -0.54
SMAD6-204ENST00000559931 NAV3Q8IVL0 2385 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 LINC00854A0A1B0GVQ3 168 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 ODF3BA8MYP8 253 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 BUB1B-PAK6H3BSN5 160 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 FSHBP01225 129 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 IGLV1-47P01700 117 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 TBPP20226 339 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 LUMP51884 338 aaPredicted RBP11.65□□□□□ -0.54
SMAD6-204ENST00000559931 FXYD4P59646 89 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 HERV-K104P61576 105 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 MEF2DQ14814 521 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 SSX2Q16385 188 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 BAK1Q16611 211 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 LY6G6FQ5SQ64 297 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 MINOS1Q5TGZ0 78 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 SLC25A48Q6ZT89 311 aaKnown RBP11.65□□□□□ -0.54
SMAD6-204ENST00000559931 OVCH2Q7RTZ1 564 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 BCL6BQ8N143 479 aaPredicted RBP11.65□□□□□ -0.54
SMAD6-204ENST00000559931 LINC00311Q8N616 119 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 ZNF439Q8NDP4 499 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 ZDHHC16Q969W1 377 aa11.65□□□□□ -0.54
SMAD6-204ENST00000559931 ABHD14BQ96IU4 210 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms