RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 TRAT1Q6PIZ9 186 aa14.88□□□□□ -0.03
SNX1-208ENST00000559844 OR4D5Q8NGN0 318 aa14.88□□□□□ -0.03
SNX1-208ENST00000559844 GALMQ96C23 342 aa14.88□□□□□ -0.03
SNX1-208ENST00000559844 ABHD14BQ96IU4 210 aa14.88□□□□□ -0.03
SNX1-208ENST00000559844 RBM7Q9Y580 266 aaKnown RBP14.88□□□□□ -0.03
SNX1-208ENST00000559844 POMT1Q9Y6A1 747 aa14.88□□□□□ -0.03
SNX1-208ENST00000559844 DCHS2Q6V1P9 2916 aa14.88□□□□□ -0.03
SNX1-208ENST00000559844 MFSD2BA6NFX1 497 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 I3L521 148 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 CEACAM6P40199 344 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 THOC7Q6I9Y2 204 aaKnown RBP14.87□□□□□ -0.03
SNX1-208ENST00000559844 FAM219AQ8IW50 185 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 OR52M1Q8NGK5 317 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 ANGPTL6Q8NI99 470 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 PPP1R35Q8TAP8 253 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 OR2V2Q96R30 315 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 TMEM204Q9BSN7 226 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 SDHAF2Q9NX18 166 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 VDAC1P21796 283 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 IL2RGP31785 369 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 PRDX2P32119 198 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 P2RY1P47900 373 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 KRBOX4Q5JUW0 171 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 GPR157Q5UAW9 335 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 NEUROG1Q92886 237 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 COQ2Q96H96 371 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 LURAP1Q96LR2 239 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 REG4Q9BYZ8 158 aa14.87□□□□□ -0.03
SNX1-208ENST00000559844 TNFSF12O43508 249 aa14.86□□□□□ -0.03
SNX1-208ENST00000559844 GABRA2P47869 451 aa14.86□□□□□ -0.03
SNX1-208ENST00000559844 P2RX3P56373 397 aa14.86□□□□□ -0.03
SNX1-208ENST00000559844 AESQ08117 197 aa14.86□□□□□ -0.03
SNX1-208ENST00000559844 GNMTQ14749 295 aa14.86□□□□□ -0.03
SNX1-208ENST00000559844 FAM74A1Q5RGS3 127 aa14.86□□□□□ -0.03
SNX1-208ENST00000559844 MRPL37Q9BZE1 423 aaKnown RBP14.86□□□□□ -0.03
SNX1-208ENST00000559844 TOLLIPQ9H0E2 274 aa14.86□□□□□ -0.03
SNX1-208ENST00000559844 C12orf77C9JDV5 145 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 SPRY3O43610 288 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 GPR137BO60478 399 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 GOSR1O95249 250 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 GATA4P43694 442 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 EIF5AL1Q6IS14 154 aaKnown RBP14.85□□□□□ -0.03
SNX1-208ENST00000559844 HSD17B13Q7Z5P4 300 aaPredicted RBP14.85□□□□□ -0.03
SNX1-208ENST00000559844 CD177Q8N6Q3 437 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 ZBTB34Q8NCN2 500 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 KCNS2Q9ULS6 477 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 GAPDHP04406 335 aaKnown RBP14.85□□□□□ -0.03
SNX1-208ENST00000559844 SERPINE2P07093 398 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 PSG2P11465 335 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 EGR1P18146 543 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 PVALBP20472 110 aaPredicted RBP14.85□□□□□ -0.03
SNX1-208ENST00000559844 TNFSF4P23510 183 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 NKX2-1P43699 371 aaPredicted RBP14.85□□□□□ -0.03
SNX1-208ENST00000559844 HIST2H2BCQ6DN03 193 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 MOGAT3Q86VF5 341 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 NINJ1Q92982 152 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 ZDHHC8Q9ULC8 765 aa14.85□□□□□ -0.03
SNX1-208ENST00000559844 RCL1Q9Y2P8 373 aaKnown RBP14.85□□□□□ -0.03
SNX1-208ENST00000559844 A0A1W2PPR1 153 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 RNF212BA8MTL3 300 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 ZNF672Q499Z4 452 aaPredicted RBP14.84□□□□□ -0.03
SNX1-208ENST00000559844 NMSQ5H8A3 153 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 EIF4E3Q8N5X7 224 aaKnown RBP14.84□□□□□ -0.03
SNX1-208ENST00000559844 GCSAMQ8N6F7 178 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 OR1L1Q8NH94 360 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 RNF141Q8WVD5 230 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 ITLN1Q8WWA0 313 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 SNX22Q96L94 193 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 GPHA2Q96T91 129 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 PLEKHF2Q9H8W4 249 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 LIN7CQ9NUP9 197 aaKnown RBP14.84□□□□□ -0.03
SNX1-208ENST00000559844 IL19Q9UHD0 177 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 METRNQ9UJH8 293 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 E7EQL1 145 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 ADAM20O43506 726 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 JTBO76095 146 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 IGLV2-14P01704 120 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 HBZP02008 142 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 SLC25A6P12236 298 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 MSMO1Q15800 293 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 OR51H1Q8NH63 302 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 ERGIC1Q969X5 290 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 OR2S2Q9NQN1 319 aa14.84□□□□□ -0.03
SNX1-208ENST00000559844 CISD1Q9NZ45 108 aaKnown RBP14.84□□□□□ -0.03
SNX1-208ENST00000559844 FGF16O43320 207 aa14.83□□□□□ -0.04
SNX1-208ENST00000559844 ZNF737O75373 536 aa14.83□□□□□ -0.04
SNX1-208ENST00000559844 LHBP01229 141 aa14.83□□□□□ -0.04
SNX1-208ENST00000559844 OR8U9P0C7N5 309 aa14.83□□□□□ -0.04
SNX1-208ENST00000559844 TMEM33P57088 247 aa14.83□□□□□ -0.04
SNX1-208ENST00000559844 TNFAIP6P98066 277 aaPredicted RBP14.83□□□□□ -0.04
SNX1-208ENST00000559844 HOXA4Q00056 320 aaPredicted RBP14.83□□□□□ -0.04
SNX1-208ENST00000559844 ZNF295-AS1Q8N0V1 137 aa14.83□□□□□ -0.04
SNX1-208ENST00000559844 ZNF645Q8N7E2 425 aa14.83□□□□□ -0.04
SNX1-208ENST00000559844 OR8U1Q8NH10 309 aa14.83□□□□□ -0.04
SNX1-208ENST00000559844 UBALD1Q8TB05 177 aa14.83□□□□□ -0.04
SNX1-208ENST00000559844 MRGPRDQ8TDS7 321 aa14.83□□□□□ -0.04
SNX1-208ENST00000559844 FBXL17Q9UF56 701 aa14.83□□□□□ -0.04
SNX1-208ENST00000559844 PPP1R3CQ9UQK1 317 aa14.83□□□□□ -0.04
SNX1-208ENST00000559844 CENPEQ02224 2701 aa14.83□□□□□ -0.04
SNX1-208ENST00000559844 LRBAP50851 2863 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms