RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 TMEM268Q5VZI3 342 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 FAM53AQ6NSI3 398 aaPredicted RBP10.53□□□□□ -0.72
USP3-213ENST00000559711 PRSS54Q6PEW0 395 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 TEX261Q6UWH6 196 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 MEX3BQ6ZN04 569 aaKnown RBP10.53□□□□□ -0.72
USP3-213ENST00000559711 ACOT7LQ6ZUV0 252 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 KCNRGQ8N5I3 272 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 DRAM1Q8N682 238 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 SLC35G3Q8N808 338 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 LINC00574Q9H8X3 128 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 RAB9BQ9NP90 201 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 CALYQ9NYX4 217 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 JPT1Q9UK76 154 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 U3KQ87 197 aa10.53□□□□□ -0.72
USP3-213ENST00000559711 SMG1Q96Q15 3661 aaKnown RBP10.53□□□□□ -0.72
USP3-213ENST00000559711 PKDREJQ9NTG1 2253 aa10.52□□□□□ -0.72
USP3-213ENST00000559711 TRGV10A0A0A0MS01 117 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 PIGBOS1A0A0B4J2F0 54 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 KBTBD11-OT1A0A1B0GTJ5 212 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 RNF222A6NCQ9 220 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 TMPRSS2O15393 492 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 YPEL1O60688 119 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 FSTL3O95633 263 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 LOXL3P58215 753 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 EIF4EBP1Q13541 118 aaPredicted RBP10.52□□□□□ -0.73
USP3-213ENST00000559711 C17orf58Q2M2W7 97 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 ZNF695Q8IW36 515 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 OR8H1Q8NGG4 311 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 RBPMSQ93062 196 aaKnown RBP10.52□□□□□ -0.73
USP3-213ENST00000559711 CNTNAP3BQ96NU0 1288 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 YPEL2Q96QA6 119 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 AGMATQ9BSE5 352 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 CNTNAP3Q9BZ76 1288 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 ARL6Q9H0F7 186 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 KAAG1Q9UBP8 84 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 CLN8Q9UBY8 286 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 KCNS2Q9ULS6 477 aa10.52□□□□□ -0.73
USP3-213ENST00000559711 MEX3AA1L020 520 aaKnown RBP10.51□□□□□ -0.73
USP3-213ENST00000559711 NDUFA2O43678 99 aa10.51□□□□□ -0.73
USP3-213ENST00000559711 PET100P0DJ07 73 aa10.51□□□□□ -0.73
USP3-213ENST00000559711 MORN2Q502X0 79 aa10.51□□□□□ -0.73
USP3-213ENST00000559711 TCF23Q7RTU1 214 aa10.51□□□□□ -0.73
USP3-213ENST00000559711 ZNF680Q8NEM1 530 aa10.51□□□□□ -0.73
USP3-213ENST00000559711 OR51H1Q8NH63 302 aa10.51□□□□□ -0.73
USP3-213ENST00000559711 EDARADDQ8WWZ3 215 aa10.51□□□□□ -0.73
USP3-213ENST00000559711 CBLN4Q9NTU7 201 aa10.51□□□□□ -0.73
USP3-213ENST00000559711 RNF150Q9ULK6 438 aa10.51□□□□□ -0.73
USP3-213ENST00000559711 IGHV3-43A0A0B4J1X8 118 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 CLEC18AA5D8T8 446 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 RNF212BA8MTL3 300 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 ITGB1BP1O14713 200 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 IGHV3-43DP0DP04 118 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 IGFBP2P18065 325 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 VDAC1P21796 283 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 MEF2CQ06413 473 aaPredicted RBP10.5□□□□□ -0.73
USP3-213ENST00000559711 HFEQ30201 348 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 NMSQ5H8A3 153 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 C11orf71Q6IPW1 123 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 INO80EQ8NBZ0 244 aaPredicted RBP10.5□□□□□ -0.73
USP3-213ENST00000559711 CLEC18CQ8NCF0 446 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 C5orf30Q96GV9 206 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 OR2D2Q9H210 308 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 PLEKHF2Q9H8W4 249 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 ZFP57Q9NU63 452 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 LIN7CQ9NUP9 197 aaKnown RBP10.5□□□□□ -0.73
USP3-213ENST00000559711 OR5AC2Q9NZP5 309 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 GNG12Q9UBI6 72 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 SLC25A10Q9UBX3 287 aaPredicted RBP10.5□□□□□ -0.73
USP3-213ENST00000559711 DYSFO75923 2080 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 hADV38S2A0JD32 116 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 ZNF729A6NN14 1252 aaPredicted RBP10.5□□□□□ -0.73
USP3-213ENST00000559711 FCN3O75636 299 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 SERPINE2P07093 398 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 DANCRP0C864 163 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 NDUFA5Q16718 116 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 TMEM30BQ3MIR4 351 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 ZNF585BQ52M93 769 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 DTX2Q86UW9 622 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 OR4D5Q8NGN0 318 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 OR1S1Q8NH92 325 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 DCUN1D4Q92564 292 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 SPIN2AQ99865 258 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 SPIN2BQ9BPZ2 258 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 TAS2R3Q9NYW6 316 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 LINC00312Q9Y6C7 94 aa10.5□□□□□ -0.73
USP3-213ENST00000559711 ADAM20O43506 726 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 DEDDO75618 318 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 RP2O75695 350 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 CFDP00746 253 aaPredicted RBP10.49□□□□□ -0.73
USP3-213ENST00000559711 IFNA7P01567 189 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 MBPP02686 304 aaPredicted RBP10.49□□□□□ -0.73
USP3-213ENST00000559711 RLN2P04090 185 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 NDUFB7P17568 137 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 COL8A2P25067 703 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 AP2S1P53680 142 aaPredicted RBP10.49□□□□□ -0.73
USP3-213ENST00000559711 LYPD2Q6UXB3 125 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 ZNF66Q6ZN08 573 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 FGFRL1Q8N441 504 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 TCTEX1D1Q8N7M0 179 aa10.49□□□□□ -0.73
USP3-213ENST00000559711 OR52M1Q8NGK5 317 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms