RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 Q6ZS49 121 aa16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 DYNC2LI1Q8TCX1 351 aa16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 ST6GALNAC5Q9BVH7 336 aa16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 PARP12Q9H0J9 701 aaKnown RBP16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 ABCB10Q9NRK6 738 aa16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 OR1A1Q9P1Q5 309 aa16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 SLC23A1Q9UHI7 598 aa16.32■□□□□ 0.2
TSPAN3-207ENST00000559494 DPPA5A6NC42 116 aa16.31■□□□□ 0.2
TSPAN3-207ENST00000559494 HPGDSO60760 199 aa16.31■□□□□ 0.2
TSPAN3-207ENST00000559494 RGS11O94810 467 aa16.31■□□□□ 0.2
TSPAN3-207ENST00000559494 APOA1P02647 267 aa16.31■□□□□ 0.2
TSPAN3-207ENST00000559494 HKR1P10072 659 aa16.31■□□□□ 0.2
TSPAN3-207ENST00000559494 CEACAM6P40199 344 aa16.31■□□□□ 0.2
TSPAN3-207ENST00000559494 MZT2AQ6P582 158 aa16.31■□□□□ 0.2
TSPAN3-207ENST00000559494 CCBE1Q6UXH8 406 aaPredicted RBP16.31■□□□□ 0.2
TSPAN3-207ENST00000559494 OR4A4PQ8NGN8 299 aa16.31■□□□□ 0.2
TSPAN3-207ENST00000559494 TOMM40LQ969M1 308 aa16.31■□□□□ 0.2
TSPAN3-207ENST00000559494 A0A1W2PPI3 338 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 TMEM89A2RUT3 159 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 A6NDX4 124 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 ELK1P19419 428 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 ZBTB25P24278 435 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 CD24P25063 80 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 KIR2DS4P43632 304 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 ZNF137PP52743 207 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 ACTG1P63261 375 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 KIR2DS1Q14954 304 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 IGSF11Q5DX21 431 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 AP3S1Q92572 193 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 ABHD14AQ9BUJ0 271 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 C1RLQ9NZP8 487 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 RSL24D1Q9UHA3 163 aaKnown RBP16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 TCF19Q9Y242 345 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 STAB1Q9NY15 2570 aa16.3■□□□□ 0.2
TSPAN3-207ENST00000559494 HSD17B6O14756 317 aa16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 HSPA12AO43301 675 aa16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 GAPDHP04406 335 aaKnown RBP16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 CRYBA1P05813 215 aa16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 BRS3P32247 399 aa16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 REG1BP48304 166 aa16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 RAB7AP51149 207 aa16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 TAS2R20P59543 309 aa16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 RELBQ01201 579 aa16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 ZNF816Q0VGE8 651 aaPredicted RBP16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 FBLN7Q53RD9 439 aa16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 TMEM69Q5SWH9 247 aa16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 CCDC144NLQ6NUI1 221 aa16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 ODF3L1Q8IXM7 274 aa16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 LYG1Q8N1E2 194 aa16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 GCDHQ92947 438 aaPredicted RBP16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 CABLES2Q9BTV7 478 aa16.29■□□□□ 0.2
TSPAN3-207ENST00000559494 FAM90A9PA6NNJ1 464 aa16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 TIMM23O14925 209 aa16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 HLA-DQB1P01920 261 aa16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 IL3RAP26951 378 aa16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 SOX6P35712 828 aa16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 MNDAP41218 407 aa16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 RPL15P61313 204 aaKnown RBP16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 FOXB2Q5VYV0 432 aa16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 TMEM219Q86XT9 240 aa16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 OR8H3Q8N146 312 aa16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 DRAM1Q8N682 238 aa16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 GVQW1Q8N7I0 195 aa16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 OR2AK2Q8NG84 335 aa16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 CFHR4Q92496 578 aa16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 TOLLIPQ9H0E2 274 aa16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 C11orf54Q9H0W9 315 aaPredicted RBP16.28■□□□□ 0.2
TSPAN3-207ENST00000559494 TRBV6-7A0A0A0MS04 114 aa16.27■□□□□ 0.2
TSPAN3-207ENST00000559494 IGHV1-3A0A0C4DH29 117 aa16.27■□□□□ 0.2
TSPAN3-207ENST00000559494 ITGB1BP1O14713 200 aa16.27■□□□□ 0.2
TSPAN3-207ENST00000559494 BET1O15155 118 aa16.27■□□□□ 0.2
TSPAN3-207ENST00000559494 ST8SIA5O15466 376 aa16.27■□□□□ 0.2
TSPAN3-207ENST00000559494 CHST1O43916 411 aa16.27■□□□□ 0.2
TSPAN3-207ENST00000559494 ARHGDIBP52566 201 aa16.27■□□□□ 0.2
TSPAN3-207ENST00000559494 RTN4IP1Q8WWV3 396 aaPredicted RBP16.27■□□□□ 0.2
TSPAN3-207ENST00000559494 AGMATQ9BSE5 352 aa16.27■□□□□ 0.2
TSPAN3-207ENST00000559494 IFI27L2Q9H2X8 130 aa16.27■□□□□ 0.2
TSPAN3-207ENST00000559494 CCDC59Q9P031 241 aaKnown RBP16.27■□□□□ 0.2
TSPAN3-207ENST00000559494 SMIM31A0A1B0GVY4 71 aa16.26■□□□□ 0.19
TSPAN3-207ENST00000559494 CTDSP2O14595 271 aa16.26■□□□□ 0.19
TSPAN3-207ENST00000559494 OR3A3P47888 321 aa16.26■□□□□ 0.19
TSPAN3-207ENST00000559494 DHRS7BQ6IAN0 325 aaPredicted RBP16.26■□□□□ 0.19
TSPAN3-207ENST00000559494 MOB3BQ86TA1 216 aa16.26■□□□□ 0.19
TSPAN3-207ENST00000559494 THNSL2Q86YJ6 484 aa16.26■□□□□ 0.19
TSPAN3-207ENST00000559494 OR56B4Q8NH76 319 aa16.26■□□□□ 0.19
TSPAN3-207ENST00000559494 CAPSLQ8WWF8 208 aa16.26■□□□□ 0.19
TSPAN3-207ENST00000559494 MIXL1Q9H2W2 232 aa16.26■□□□□ 0.19
TSPAN3-207ENST00000559494 RDH8Q9NYR8 311 aa16.26■□□□□ 0.19
TSPAN3-207ENST00000559494 PITPNC1Q9UKF7 332 aa16.26■□□□□ 0.19
TSPAN3-207ENST00000559494 MRPS7Q9Y2R9 242 aaKnown RBP16.26■□□□□ 0.19
TSPAN3-207ENST00000559494 TENM1Q9UKZ4 2725 aa16.26■□□□□ 0.19
TSPAN3-207ENST00000559494 DNHD1Q96M86 4753 aa16.26■□□□□ 0.19
TSPAN3-207ENST00000559494 FAM25AB3EWG3 89 aa16.25■□□□□ 0.19
TSPAN3-207ENST00000559494 FAM25CB3EWG5 89 aa16.25■□□□□ 0.19
TSPAN3-207ENST00000559494 FAM25GB3EWG6 89 aa16.25■□□□□ 0.19
TSPAN3-207ENST00000559494 ZNF701M0R085 212 aaPredicted RBP16.25■□□□□ 0.19
TSPAN3-207ENST00000559494 LANCL1O43813 399 aa16.25■□□□□ 0.19
TSPAN3-207ENST00000559494 DIRAS3O95661 229 aa16.25■□□□□ 0.19
TSPAN3-207ENST00000559494 HABP2Q14520 560 aaPredicted RBP16.25■□□□□ 0.19
TSPAN3-207ENST00000559494 LIAT1Q6ZQX7 453 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms