RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 NBR2O15453 112 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 HLA-DRB1P01911 266 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 CHATP28329 748 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 INSL4Q14641 139 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 LY6G6FQ5SQ64 297 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 TMEM65Q6PI78 240 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 ZNF833PQ6ZTB9 187 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 ODF3L1Q8IXM7 274 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 OR2AK2Q8NG84 335 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 MYOZ3Q8TDC0 251 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 WWC2-AS2Q96NR7 200 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 NABP2Q9BQ15 211 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 SULT4A1Q9BR01 284 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 PARP11Q9NR21 331 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 ABRACLQ9P1F3 81 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 LRRC42Q9Y546 428 aa11.66□□□□□ -0.54
LRRC28-213ENST00000559399 SAA2-SAA4A0A096LPE2 208 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 ATP6V0E1O15342 81 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 SAA2P0DJI9 122 aaPredicted RBP11.65□□□□□ -0.54
LRRC28-213ENST00000559399 VSIG8P0DPA2 414 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 PPIFP30405 207 aaKnown RBP11.65□□□□□ -0.54
LRRC28-213ENST00000559399 OR3A3P47888 321 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 RPS27AP62979 156 aaKnown RBP11.65□□□□□ -0.54
LRRC28-213ENST00000559399 HMGN3Q15651 99 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 ACSM3Q53FZ2 586 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 FAM27D1Q5T7N8 215 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 GLT8D1Q68CQ7 371 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 C5orf24Q7Z6I8 188 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 MS4A15Q8N5U1 240 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 OR11H1Q8NG94 326 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 PHYHIPQ92561 330 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 RITA1Q96K30 269 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 UBE2E2Q96LR5 201 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 MND1Q9BWT6 205 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 TMEM59Q9BXS4 323 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 IFI27L2Q9H2X8 130 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 OR51J1Q9H342 316 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 FKBP14Q9NWM8 211 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 STEAP1Q9UHE8 339 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 WSB1Q9Y6I7 421 aa11.65□□□□□ -0.54
LRRC28-213ENST00000559399 KMT2CQ8NEZ4 4911 aaKnown RBP11.65□□□□□ -0.54
LRRC28-213ENST00000559399 IGHV7-81A0A0B4J1V7 117 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 G3V318 75 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 OR8U8P0C7N1 319 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 NHLRC4P0CG21 123 aaPredicted RBP11.64□□□□□ -0.55
LRRC28-213ENST00000559399 CNTFRP26992 372 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 ECI1P42126 302 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 GABPB1Q06547 395 aaPredicted RBP11.64□□□□□ -0.55
LRRC28-213ENST00000559399 C5orf64Q2M2E5 130 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 RBM48Q5RL73 367 aaKnown RBP11.64□□□□□ -0.55
LRRC28-213ENST00000559399 C1orf100Q5SVJ3 147 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 OR10K2Q6IF99 312 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 LIN54Q6MZP7 749 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 FAM71F2Q6NXP2 309 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 C6orf201Q7Z4U5 140 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 LRRTM1Q86UE6 522 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 SVOPQ8N4V2 548 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 IL1F10Q8WWZ1 152 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 PRR25Q96S07 402 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 FAAP24Q9BTP7 215 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 TMED9Q9BVK6 235 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 ANKRD60Q9BZ19 345 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 KLK15Q9H2R5 256 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 GNB4Q9HAV0 340 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 CHMP1AQ9HD42 196 aaPredicted RBP11.64□□□□□ -0.55
LRRC28-213ENST00000559399 KIAA1456Q9P272 454 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 SCOCQ9UIL1 159 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 VSIG4Q9Y279 399 aa11.64□□□□□ -0.55
LRRC28-213ENST00000559399 TRAV41A0A0B4J266 112 aa11.63□□□□□ -0.55
LRRC28-213ENST00000559399 IGLV1-40P01703 118 aa11.63□□□□□ -0.55
LRRC28-213ENST00000559399 HTR2CP28335 458 aa11.63□□□□□ -0.55
LRRC28-213ENST00000559399 BLVRBP30043 206 aaPredicted RBP11.63□□□□□ -0.55
LRRC28-213ENST00000559399 ZNF260Q3ZCT1 412 aa11.63□□□□□ -0.55
LRRC28-213ENST00000559399 OGFRL1Q5TC84 451 aaPredicted RBP11.63□□□□□ -0.55
LRRC28-213ENST00000559399 MOB1BQ7L9L4 216 aa11.63□□□□□ -0.55
LRRC28-213ENST00000559399 ZNF491Q8N8L2 437 aa11.63□□□□□ -0.55
LRRC28-213ENST00000559399 NPBQ8NG41 125 aa11.63□□□□□ -0.55
LRRC28-213ENST00000559399 OR1N2Q8NGR9 330 aa11.63□□□□□ -0.55
LRRC28-213ENST00000559399 KCNG3Q8TAE7 436 aa11.63□□□□□ -0.55
LRRC28-213ENST00000559399 TM2D1Q9BX74 207 aa11.63□□□□□ -0.55
LRRC28-213ENST00000559399 VCXQ9H320 206 aa11.63□□□□□ -0.55
LRRC28-213ENST00000559399 PIPOXQ9P0Z9 390 aa11.63□□□□□ -0.55
LRRC28-213ENST00000559399 LSM4Q9Y4Z0 139 aaKnown RBP11.63□□□□□ -0.55
LRRC28-213ENST00000559399 I3L521 148 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 CASQ2O14958 399 aaPredicted RBP11.62□□□□□ -0.55
LRRC28-213ENST00000559399 SLC22A1O15245 554 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 ST8SIA5O15466 376 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 NDUFA3O95167 84 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 NAPSAO96009 420 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 CDK1P06493 297 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 RUNX1Q01196 453 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 ZNF616Q08AN1 781 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 UNC119Q13432 240 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 KIAA0141Q14154 515 aaPredicted RBP11.62□□□□□ -0.55
LRRC28-213ENST00000559399 SPHARQ15513 63 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 HSD17B12Q53GQ0 312 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 RNLSQ5VYX0 342 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 FAM131AQ6UXB0 335 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 SETD6Q8TBK2 473 aa11.62□□□□□ -0.55
LRRC28-213ENST00000559399 OR5B12Q96R08 314 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms