RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 VASH2Q86V25 355 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 CA5BP1Q8WTZ4 195 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 BCL2L2Q92843 193 aaPredicted RBP14.02□□□□□ -0.17
SPG11-215ENST00000559193 HIST1H2BHQ93079 126 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 HIST1H2BNQ99877 126 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 HIST1H2BMQ99879 126 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 TMEM9BQ9NQ34 198 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 ABI3Q9P2A4 366 aa14.02□□□□□ -0.17
SPG11-215ENST00000559193 RBM7Q9Y580 266 aaKnown RBP14.02□□□□□ -0.17
SPG11-215ENST00000559193 B4DEV8 164 aa14.01□□□□□ -0.17
SPG11-215ENST00000559193 WDR1O75083 606 aa14.01□□□□□ -0.17
SPG11-215ENST00000559193 ERVK11-1P61568 191 aa14.01□□□□□ -0.17
SPG11-215ENST00000559193 DCAF10Q5QP82 559 aa14.01□□□□□ -0.17
SPG11-215ENST00000559193 MYPOPQ86VE0 399 aaPredicted RBP14.01□□□□□ -0.17
SPG11-215ENST00000559193 FAM209BQ5JX69 171 aa14.01□□□□□ -0.17
SPG11-215ENST00000559193 LILRB2Q8N423 598 aa14.01□□□□□ -0.17
SPG11-215ENST00000559193 DRAM1Q8N682 238 aa14.01□□□□□ -0.17
SPG11-215ENST00000559193 SCCPDHQ8NBX0 429 aa14.01□□□□□ -0.17
SPG11-215ENST00000559193 RTL8AQ9BWD3 113 aa14.01□□□□□ -0.17
SPG11-215ENST00000559193 RNF150Q9ULK6 438 aa14.01□□□□□ -0.17
SPG11-215ENST00000559193 ARHGAP21Q5T5U3 1957 aa14□□□□□ -0.17
SPG11-215ENST00000559193 TRGC2P03986 189 aa14□□□□□ -0.17
SPG11-215ENST00000559193 MEOX1P50221 254 aa14□□□□□ -0.17
SPG11-215ENST00000559193 HBG1P69891 147 aa14□□□□□ -0.17
SPG11-215ENST00000559193 HBG2P69892 147 aa14□□□□□ -0.17
SPG11-215ENST00000559193 PYY3Q5JQD4 70 aa14□□□□□ -0.17
SPG11-215ENST00000559193 OR4C12Q96R67 309 aa14□□□□□ -0.17
SPG11-215ENST00000559193 CDX2Q99626 313 aaPredicted RBP14□□□□□ -0.17
SPG11-215ENST00000559193 WDR61Q9GZS3 305 aaKnown RBP14□□□□□ -0.17
SPG11-215ENST00000559193 WDFY4Q6ZS81 3184 aa14□□□□□ -0.17
SPG11-215ENST00000559193 C19orf67A6NJJ6 358 aa14□□□□□ -0.17
SPG11-215ENST00000559193 SERF2P84101 59 aa14□□□□□ -0.17
SPG11-215ENST00000559193 ACSF3Q4G176 576 aaPredicted RBP14□□□□□ -0.17
SPG11-215ENST00000559193 SPANXN5Q5MJ07 72 aa14□□□□□ -0.17
SPG11-215ENST00000559193 MBNL3Q9NUK0 354 aaKnown RBP14□□□□□ -0.17
SPG11-215ENST00000559193 MED12LQ86YW9 2145 aa14□□□□□ -0.17
SPG11-215ENST00000559193 CELA3BP08861 270 aa13.99□□□□□ -0.17
SPG11-215ENST00000559193 CEACAM6P40199 344 aa13.99□□□□□ -0.17
SPG11-215ENST00000559193 PNRC1Q12796 327 aaPredicted RBP13.99□□□□□ -0.17
SPG11-215ENST00000559193 TMEM41BQ5BJD5 291 aa13.99□□□□□ -0.17
SPG11-215ENST00000559193 C1orf210Q8IVY1 113 aa13.99□□□□□ -0.17
SPG11-215ENST00000559193 RND2P52198 227 aa13.99□□□□□ -0.17
SPG11-215ENST00000559193 ELLP55199 621 aaPredicted RBP13.99□□□□□ -0.17
SPG11-215ENST00000559193 FBXW9Q5XUX1 488 aa13.99□□□□□ -0.17
SPG11-215ENST00000559193 DBX2Q6ZNG2 339 aa13.99□□□□□ -0.17
SPG11-215ENST00000559193 NANOS1Q8WY41 292 aaKnown RBP13.99□□□□□ -0.17
SPG11-215ENST00000559193 PARD6GQ9BYG4 376 aaPredicted RBP13.99□□□□□ -0.17
SPG11-215ENST00000559193 SDF2L1Q9HCN8 221 aa13.99□□□□□ -0.17
SPG11-215ENST00000559193 WIPI2Q9Y4P8 454 aa13.99□□□□□ -0.17
SPG11-215ENST00000559193 AHCTF1Q8WYP5 2266 aa13.99□□□□□ -0.17
SPG11-215ENST00000559193 DNAJC13O75165 2243 aa13.99□□□□□ -0.17
SPG11-215ENST00000559193 TRBV23-1A0A0A0MS06 115 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 IGHV3-64DA0A0J9YX35 117 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 MAP1LC3B2A6NCE7 125 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 CYB5R3P00387 301 aaPredicted RBP13.98□□□□□ -0.17
SPG11-215ENST00000559193 PGA5P0DJD9 388 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 ERVS71-1P61550 626 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 Q8IYB0 196 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 OR13D1Q8NGV5 346 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 FAM210BQ96KR6 192 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 GPR87Q9BY21 358 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 MAP1LC3BQ9GZQ8 125 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 DOCK7Q96N67 2140 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 UBE2L5PA0A1B0GUS4 154 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 SP1P08047 785 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 PLA2G5P39877 138 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 ALKBH6Q3KRA9 238 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 C1orf87Q8N0U7 546 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 FGFRL1Q8N441 504 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 TAF15Q92804 592 aaKnown RBP eCLIP13.98□□□□□ -0.17
SPG11-215ENST00000559193 P2RX4Q99571 388 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 SSX3Q99909 188 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 OR2J1Q9GZK6 312 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 TMEM242Q9NWH2 141 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 GAR1Q9NY12 217 aaKnown RBP13.98□□□□□ -0.17
SPG11-215ENST00000559193 VAX2Q9UIW0 290 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 POLDIP2Q9Y2S7 368 aa13.98□□□□□ -0.17
SPG11-215ENST00000559193 CEBPZOSA8MTT3 80 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 CDIPTO14735 213 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 SMPD2O60906 423 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 NXPH2O95156 264 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 SLC38A11Q08AI6 406 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 ZNF146Q15072 292 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 TBC1D28Q2M2D7 210 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 GFI1BQ5VTD9 330 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 CDPF1Q6NVV7 123 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 FAM180AQ6UWF9 173 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 MRGPRGQ86SM5 289 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 RBKSQ9H477 322 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 TINAGQ9UJW2 476 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 C21orf140B9A014 251 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 CLDN34H7C241 214 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 IGKV1D-33P01593 117 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 IGKV1-33P01594 117 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 S100A2P29034 98 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 TMEM14EPQ6UXP3 125 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 BEND4Q6ZU67 534 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 MDS2Q8NDY4 140 aa13.97□□□□□ -0.17
SPG11-215ENST00000559193 PINX1Q96BK5 328 aaKnown RBP13.97□□□□□ -0.17
SPG11-215ENST00000559193 C5orf30Q96GV9 206 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms