RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 MOB4Q9Y3A3 225 aa9.56□□□□□ -0.88
TPM1-216ENST00000558910 TCRBV4S1A1TA0A5B7 111 aa9.55□□□□□ -0.88
TPM1-216ENST00000558910 OOSP1A8MZH6 123 aa9.55□□□□□ -0.88
TPM1-216ENST00000558910 PDCD5O14737 125 aa9.55□□□□□ -0.88
TPM1-216ENST00000558910 DENRO43583 198 aaKnown RBP9.55□□□□□ -0.88
TPM1-216ENST00000558910 AMY1AP04745 511 aa9.55□□□□□ -0.88
TPM1-216ENST00000558910 AMY2AP04746 511 aa9.55□□□□□ -0.88
TPM1-216ENST00000558910 GSTP1P09211 210 aaKnown RBP9.55□□□□□ -0.88
TPM1-216ENST00000558910 OR3A3P47888 321 aa9.55□□□□□ -0.88
TPM1-216ENST00000558910 ZNF329Q86UD4 541 aa9.55□□□□□ -0.88
TPM1-216ENST00000558910 OR52M1Q8NGK5 317 aa9.55□□□□□ -0.88
TPM1-216ENST00000558910 RTN4IP1Q8WWV3 396 aaPredicted RBP9.55□□□□□ -0.88
TPM1-216ENST00000558910 MAFIPQ8WZ33 124 aa9.55□□□□□ -0.88
TPM1-216ENST00000558910 TM2D1Q9BX74 207 aa9.55□□□□□ -0.88
TPM1-216ENST00000558910 PECRQ9BY49 303 aa9.55□□□□□ -0.88
TPM1-216ENST00000558910 RAB9BQ9NP90 201 aa9.55□□□□□ -0.88
TPM1-216ENST00000558910 STEAP1Q9UHE8 339 aa9.55□□□□□ -0.88
TPM1-216ENST00000558910 NOTCH1P46531 2555 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 LOC100506127A0A0U1RQW1 187 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 RAB3BP20337 219 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 MXD1Q05195 221 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 MOGAT2Q3SYC2 334 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 MORN2Q502X0 79 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 C11orf88Q6PI97 169 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 TRAT1Q6PIZ9 186 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 Q6ZPA2 131 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 SLC16A12Q6ZSM3 486 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 SLC25A48Q6ZT89 311 aaKnown RBP9.54□□□□□ -0.88
TPM1-216ENST00000558910 C16orf82Q7Z2V1 217 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 OR8H3Q8N146 312 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 Q8N2B8 174 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 ZNF439Q8NDP4 499 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 GALMQ96C23 342 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 EAF1Q96JC9 268 aaPredicted RBP9.54□□□□□ -0.88
TPM1-216ENST00000558910 CMSS1Q9BQ75 279 aaKnown RBP9.54□□□□□ -0.88
TPM1-216ENST00000558910 ABHD14AQ9BUJ0 271 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 PARP12Q9H0J9 701 aaKnown RBP9.54□□□□□ -0.88
TPM1-216ENST00000558910 OR51E2Q9H255 320 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 RNF167Q9H6Y7 350 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 NDUFB11Q9NX14 153 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 OR1A1Q9P1Q5 309 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 SLC23A1Q9UHI7 598 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 RNF150Q9ULK6 438 aa9.54□□□□□ -0.88
TPM1-216ENST00000558910 TRDV1A0A1B0GX56 115 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 LINC01548A6NM66 108 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 FAM90A9PA6NNJ1 464 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 SERPINE3A8MV23 424 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 HSPA12AO43301 675 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 CA11O75493 328 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 PRB2P02812 416 aaPredicted RBP9.53□□□□□ -0.88
TPM1-216ENST00000558910 GLAP06280 429 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 CD3GP09693 182 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 CLEC2LP0C7M8 214 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 GNB3P16520 340 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 TMEM50BP56557 158 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 MRPS15P82914 257 aaKnown RBP9.53□□□□□ -0.88
TPM1-216ENST00000558910 ZNF816Q0VGE8 651 aaPredicted RBP9.53□□□□□ -0.88
TPM1-216ENST00000558910 PLAC9Q5JTB6 97 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 UBE2UQ5VVX9 321 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 GLDNQ6ZMI3 551 aaPredicted RBP9.53□□□□□ -0.88
TPM1-216ENST00000558910 OR2W3Q7Z3T1 314 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 IZUMO1Q8IYV9 350 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 LINC00311Q8N616 119 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 C5orf56Q8N8D9 126 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 DTX3Q8N9I9 347 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 OR2AK2Q8NG84 335 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 OR2T10Q8NGZ9 312 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 CHCHD6Q9BRQ6 235 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 MRPL20Q9BYC9 149 aaKnown RBP9.53□□□□□ -0.88
TPM1-216ENST00000558910 MBNL3Q9NUK0 354 aaKnown RBP9.53□□□□□ -0.88
TPM1-216ENST00000558910 TXNL4BQ9NX01 149 aaKnown RBP9.53□□□□□ -0.88
TPM1-216ENST00000558910 LRRC42Q9Y546 428 aa9.53□□□□□ -0.88
TPM1-216ENST00000558910 G3V4G9 280 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 J3QRK9 145 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 SCTP09683 121 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 PF4V1P10720 104 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 CNTFRP26992 372 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 CEACAM6P40199 344 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 F2RL1P55085 397 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 HLA-DRB3P79483 266 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 HMGN3Q15651 99 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 RPL39P5Q59GN2 51 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 ZNF773Q6PK81 442 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 LCNL1Q6ZST4 164 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 SLC35E3Q7Z769 313 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 NR2C2APQ86WQ0 139 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 THNSL2Q86YJ6 484 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 GAPTQ8N292 157 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 OR56B1Q8NGI3 324 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 ABHD14BQ96IU4 210 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 RITA1Q96K30 269 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 FANCD2OSQ96PS1 177 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 RASL11BQ9BPW5 248 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 WNT10AQ9GZT5 417 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 ATG5Q9H1Y0 275 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 ZNF230Q9UIE0 474 aaPredicted RBP9.52□□□□□ -0.89
TPM1-216ENST00000558910 DAPK2Q9UIK4 370 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 RAB22AQ9UL26 194 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 SSR3Q9UNL2 185 aa9.52□□□□□ -0.89
TPM1-216ENST00000558910 SAA2-SAA4A0A096LPE2 208 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms