RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 SRSF7Q16629 238 aaKnown RBP eCLIP12.48□□□□□ -0.41
LINC01220-201ENST00000558575 TMEM30BQ3MIR4 351 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 Q3ZCU0 254 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 TPTE2P1Q5T6R2 138 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 Q6ZS49 121 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 SLC25A48Q6ZT89 311 aaKnown RBP12.48□□□□□ -0.41
LINC01220-201ENST00000558575 C1QL4Q86Z23 238 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 TMEM86BQ8N661 226 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 SSMEM1Q8WWF3 244 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 IL1F10Q8WWZ1 152 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 ST6GALNAC6Q969X2 333 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 YPEL2Q96QA6 119 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 SSX3Q99909 188 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 OCSTAMPQ9BR26 566 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 CHIAQ9BZP6 476 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 SLIRPQ9GZT3 109 aaKnown RBP12.48□□□□□ -0.41
LINC01220-201ENST00000558575 RAB9BQ9NP90 201 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 OR1A1Q9P1Q5 309 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 JPT1Q9UK76 154 aa12.48□□□□□ -0.41
LINC01220-201ENST00000558575 VGLL3A8MV65 326 aa12.47□□□□□ -0.41
LINC01220-201ENST00000558575 FABP7O15540 132 aa12.47□□□□□ -0.41
LINC01220-201ENST00000558575 RNASE1P07998 156 aaKnown RBP12.47□□□□□ -0.41
LINC01220-201ENST00000558575 DTYMKP23919 212 aa12.47□□□□□ -0.41
LINC01220-201ENST00000558575 TALDO1P37837 337 aa12.47□□□□□ -0.41
LINC01220-201ENST00000558575 TAS2R20P59543 309 aa12.47□□□□□ -0.41
LINC01220-201ENST00000558575 AANATQ16613 207 aa12.47□□□□□ -0.41
LINC01220-201ENST00000558575 PLA1AQ53H76 456 aa12.47□□□□□ -0.41
LINC01220-201ENST00000558575 IGSF11Q5DX21 431 aa12.47□□□□□ -0.41
LINC01220-201ENST00000558575 LY6G6FQ5SQ64 297 aa12.47□□□□□ -0.41
LINC01220-201ENST00000558575 MZT2AQ6P582 158 aa12.47□□□□□ -0.41
LINC01220-201ENST00000558575 PHF21AQ96BD5 680 aa12.47□□□□□ -0.41
LINC01220-201ENST00000558575 ST6GALNAC5Q9BVH7 336 aa12.47□□□□□ -0.41
LINC01220-201ENST00000558575 CCDC59Q9P031 241 aaKnown RBP12.47□□□□□ -0.41
LINC01220-201ENST00000558575 MGAT4AQ9UM21 535 aa12.47□□□□□ -0.41
LINC01220-201ENST00000558575 POMT1Q9Y6A1 747 aa12.47□□□□□ -0.41
LINC01220-201ENST00000558575 TENM3Q9P273 2699 aa12.46□□□□□ -0.41
LINC01220-201ENST00000558575 DPPA5A6NC42 116 aa12.46□□□□□ -0.41
LINC01220-201ENST00000558575 H3BUX3 64 aa12.46□□□□□ -0.41
LINC01220-201ENST00000558575 GNG2P59768 71 aa12.46□□□□□ -0.41
LINC01220-201ENST00000558575 MRPS15P82914 257 aaKnown RBP12.46□□□□□ -0.41
LINC01220-201ENST00000558575 PITPNAQ00169 270 aa12.46□□□□□ -0.41
LINC01220-201ENST00000558575 LRRC75BQ2VPJ9 315 aa12.46□□□□□ -0.41
LINC01220-201ENST00000558575 FOXB2Q5VYV0 432 aa12.46□□□□□ -0.41
LINC01220-201ENST00000558575 STEAP3Q658P3 488 aa12.46□□□□□ -0.41
LINC01220-201ENST00000558575 C16orf87Q6PH81 154 aa12.46□□□□□ -0.41
LINC01220-201ENST00000558575 ODF3L1Q8IXM7 274 aa12.46□□□□□ -0.41
LINC01220-201ENST00000558575 GVQW1Q8N7I0 195 aa12.46□□□□□ -0.41
LINC01220-201ENST00000558575 OR4A4PQ8NGN8 299 aa12.46□□□□□ -0.41
LINC01220-201ENST00000558575 AP3S1Q92572 193 aa12.46□□□□□ -0.41
LINC01220-201ENST00000558575 NXF2Q9GZY0 626 aaKnown RBP12.46□□□□□ -0.41
LINC01220-201ENST00000558575 RSL24D1Q9UHA3 163 aaKnown RBP12.46□□□□□ -0.41
LINC01220-201ENST00000558575 CCDC160A6NGH7 325 aa12.45□□□□□ -0.42
LINC01220-201ENST00000558575 ZNF701M0R085 212 aaPredicted RBP12.45□□□□□ -0.42
LINC01220-201ENST00000558575 NOL3O60936 208 aaKnown RBP12.45□□□□□ -0.42
LINC01220-201ENST00000558575 MDKP21741 143 aaPredicted RBP12.45□□□□□ -0.42
LINC01220-201ENST00000558575 SOX6P35712 828 aa12.45□□□□□ -0.42
LINC01220-201ENST00000558575 CEACAM6P40199 344 aa12.45□□□□□ -0.42
LINC01220-201ENST00000558575 DYNLT3P51808 116 aa12.45□□□□□ -0.42
LINC01220-201ENST00000558575 MADCAM1Q13477 382 aa12.45□□□□□ -0.42
LINC01220-201ENST00000558575 TMEM69Q5SWH9 247 aa12.45□□□□□ -0.42
LINC01220-201ENST00000558575 CCBE1Q6UXH8 406 aaPredicted RBP12.45□□□□□ -0.42
LINC01220-201ENST00000558575 CREB3L1Q96BA8 519 aa12.45□□□□□ -0.42
LINC01220-201ENST00000558575 AGMATQ9BSE5 352 aa12.45□□□□□ -0.42
LINC01220-201ENST00000558575 CABLES2Q9BTV7 478 aa12.45□□□□□ -0.42
LINC01220-201ENST00000558575 TOLLIPQ9H0E2 274 aa12.45□□□□□ -0.42
LINC01220-201ENST00000558575 C11orf54Q9H0W9 315 aaPredicted RBP12.45□□□□□ -0.42
LINC01220-201ENST00000558575 DPAGT1Q9H3H5 408 aa12.45□□□□□ -0.42
LINC01220-201ENST00000558575 SLC23A1Q9UHI7 598 aa12.45□□□□□ -0.42
LINC01220-201ENST00000558575 TRBV6-7A0A0A0MS04 114 aa12.44□□□□□ -0.42
LINC01220-201ENST00000558575 A0A1W2PPI3 338 aa12.44□□□□□ -0.42
LINC01220-201ENST00000558575 CD24P25063 80 aa12.44□□□□□ -0.42
LINC01220-201ENST00000558575 KIR2DS4P43632 304 aa12.44□□□□□ -0.42
LINC01220-201ENST00000558575 ZNF137PP52743 207 aa12.44□□□□□ -0.42
LINC01220-201ENST00000558575 KIR2DS1Q14954 304 aa12.44□□□□□ -0.42
LINC01220-201ENST00000558575 LY6EQ16553 131 aa12.44□□□□□ -0.42
LINC01220-201ENST00000558575 HOGA1Q86XE5 327 aa12.44□□□□□ -0.42
LINC01220-201ENST00000558575 OR10X1Q8NGY0 326 aa12.44□□□□□ -0.42
LINC01220-201ENST00000558575 IFI27L2Q9H2X8 130 aa12.44□□□□□ -0.42
LINC01220-201ENST00000558575 MRPS7Q9Y2R9 242 aaKnown RBP12.44□□□□□ -0.42
LINC01220-201ENST00000558575 AMMECR1Q9Y4X0 333 aaPredicted RBP12.44□□□□□ -0.42
LINC01220-201ENST00000558575 COL7A1Q02388 2944 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 SMIM31A0A1B0GVY4 71 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 MEIS3P1A6NDR6 274 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 A6NDX4 124 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 FAM181BA6NEQ2 426 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 OOSP1A8MZH6 123 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 FAM25AB3EWG3 89 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 FAM25CB3EWG5 89 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 FAM25GB3EWG6 89 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 ITGB1BP1O14713 200 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 ST8SIA5O15466 376 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 GPR137BO60478 399 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 PROP1O75360 226 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 FCER2P06734 321 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 ZBTB25P24278 435 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 CEACAM3P40198 252 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 MNDAP41218 407 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 REG1BP48304 166 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 LAX1Q8IWV1 398 aa12.43□□□□□ -0.42
LINC01220-201ENST00000558575 OR5R1Q8NH85 324 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms