RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 OR1L1Q8NH94 360 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 RNF122Q9H9V4 155 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 C21orf140B9A014 251 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 H0Y980 276 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 ST8SIA5O15466 376 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 ACTL6BO94805 426 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 KCNIP4Q6PIL6 250 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 SCCPDHQ8NBX0 429 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 OR10G4Q8NGN3 311 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 OR10G9Q8NGN4 311 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 OR10G7Q8NGN6 311 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 WBP1Q96G27 269 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 C1QTNF5Q9BXJ0 243 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 MIOXQ9UGB7 285 aa13.22□□□□□ -0.29
AP4E1-202ENST00000558439 LNP1A1A4G5 178 aa13.21□□□□□ -0.29
AP4E1-202ENST00000558439 NTF4P34130 210 aa13.21□□□□□ -0.29
AP4E1-202ENST00000558439 PINX1Q96BK5 328 aaKnown RBP13.21□□□□□ -0.29
AP4E1-202ENST00000558439 USB1Q9BQ65 265 aaKnown RBP13.21□□□□□ -0.29
AP4E1-202ENST00000558439 S1PR3Q99500 378 aa13.21□□□□□ -0.29
AP4E1-202ENST00000558439 IER2Q9BTL4 223 aa13.21□□□□□ -0.29
AP4E1-202ENST00000558439 LIME1Q9H400 295 aa13.21□□□□□ -0.29
AP4E1-202ENST00000558439 LY6G6EA0A0G2JKS1 128 aa13.21□□□□□ -0.3
AP4E1-202ENST00000558439 TSTD3H0UI37 97 aa13.21□□□□□ -0.3
AP4E1-202ENST00000558439 TNFSF4P23510 183 aa13.21□□□□□ -0.3
AP4E1-202ENST00000558439 CHRNA7P36544 502 aa13.21□□□□□ -0.3
AP4E1-202ENST00000558439 CCL20P78556 96 aa13.21□□□□□ -0.3
AP4E1-202ENST00000558439 TRIP6Q15654 476 aaKnown RBP13.21□□□□□ -0.3
AP4E1-202ENST00000558439 H1FXQ92522 213 aaKnown RBP13.21□□□□□ -0.3
AP4E1-202ENST00000558439 BARX1Q9HBU1 254 aaPredicted RBP13.21□□□□□ -0.3
AP4E1-202ENST00000558439 U3KQA8 63 aa13.21□□□□□ -0.3
AP4E1-202ENST00000558439 NKX2-8O15522 239 aa13.21□□□□□ -0.3
AP4E1-202ENST00000558439 MT-CO2P00403 227 aa13.21□□□□□ -0.3
AP4E1-202ENST00000558439 OTX1P32242 354 aaPredicted RBP13.21□□□□□ -0.3
AP4E1-202ENST00000558439 MDH2P40926 338 aaKnown RBP13.21□□□□□ -0.3
AP4E1-202ENST00000558439 TMEM41BQ5BJD5 291 aa13.21□□□□□ -0.3
AP4E1-202ENST00000558439 HS3ST6Q96QI5 342 aa13.21□□□□□ -0.3
AP4E1-202ENST00000558439 TIMM8BQ9Y5J9 83 aaPredicted RBP13.21□□□□□ -0.3
AP4E1-202ENST00000558439 PRR14LQ5THK1 2151 aa13.2□□□□□ -0.3
AP4E1-202ENST00000558439 MDFIC2A0A1B0GVS7 189 aa13.2□□□□□ -0.3
AP4E1-202ENST00000558439 AQP7O14520 342 aa13.2□□□□□ -0.3
AP4E1-202ENST00000558439 ZADH2Q8N4Q0 377 aa13.2□□□□□ -0.3
AP4E1-202ENST00000558439 GINS3Q9BRX5 216 aa13.2□□□□□ -0.3
AP4E1-202ENST00000558439 PATZ1Q9HBE1 687 aaKnown RBP13.2□□□□□ -0.3
AP4E1-202ENST00000558439 C9JQL5 133 aa13.2□□□□□ -0.3
AP4E1-202ENST00000558439 ATXN7O15265 892 aaPredicted RBP13.2□□□□□ -0.3
AP4E1-202ENST00000558439 FGFRL1Q8N441 504 aa13.2□□□□□ -0.3
AP4E1-202ENST00000558439 CIB3Q96Q77 187 aaPredicted RBP13.2□□□□□ -0.3
AP4E1-202ENST00000558439 OR4C12Q96R67 309 aa13.2□□□□□ -0.3
AP4E1-202ENST00000558439 WNT9BO14905 357 aa13.2□□□□□ -0.3
AP4E1-202ENST00000558439 TMEM241Q24JQ0 296 aa13.2□□□□□ -0.3
AP4E1-202ENST00000558439 ACOT6Q3I5F7 207 aaPredicted RBP13.2□□□□□ -0.3
AP4E1-202ENST00000558439 EDARADDQ8WWZ3 215 aa13.2□□□□□ -0.3
AP4E1-202ENST00000558439 OR51I2Q9H344 312 aa13.2□□□□□ -0.3
AP4E1-202ENST00000558439 PROK2Q9HC23 129 aa13.2□□□□□ -0.3
AP4E1-202ENST00000558439 SPAARA0A1B0GVQ0 90 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 A0A1W2PPE3 182 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 NTN3O00634 580 aaPredicted RBP13.19□□□□□ -0.3
AP4E1-202ENST00000558439 PHOX2AO14813 284 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 SCGB1D1O95968 90 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 CELA3BP08861 270 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 ZNF66Q6ZN08 573 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 DTD1Q8TEA8 209 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 TMPRSS5Q9H3S3 457 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 RPRMQ9NS64 109 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 MUC22E2RYF6 1773 aaPredicted RBP13.19□□□□□ -0.3
AP4E1-202ENST00000558439 GNG10P50151 68 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 UCP2P55851 309 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 ABLIM2Q6H8Q1 611 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 OR5D13Q8NGL4 314 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 OR5P3Q8WZ94 311 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 SNX22Q96L94 193 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 TMEM265A0A087WTH1 108 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 ETV2O00321 342 aaPredicted RBP13.19□□□□□ -0.3
AP4E1-202ENST00000558439 HTD2P86397 168 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 C9orf152Q5JTZ5 239 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 C18orf12Q96KH6 178 aa13.19□□□□□ -0.3
AP4E1-202ENST00000558439 IGHV3OR15-7A0A075B7D8 119 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 FAM90A10PA6NDY2 464 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 FAM90A18PA6NE21 464 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 FAM90A16PA6NEW6 464 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 FAM90A20PA6NIJ5 464 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 FAM90A8PA6NJQ4 464 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 FAM90A7PA6NKC0 464 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 FAM90A22PA8MWA6 464 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 FAM90A12PA8MX19 464 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 FAM90A5PA8MXJ8 464 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 FAM90A23PA8MXZ1 464 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 TFF1P04155 84 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 FAM90A15PP0C7V4 464 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 FAM90A13PP0C7W8 464 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 FAM90A14PP0C7W9 464 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 FAM90A24PP0C7X0 464 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 TRAV17A0A0B4J275 112 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 C9orf172C9J069 976 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 TRGC2P03986 189 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 RPS2P15880 293 aaKnown RBP13.18□□□□□ -0.3
AP4E1-202ENST00000558439 LHX2P50458 406 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 MST1LQ2TV78 715 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 TAAR6Q96RI8 345 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 PCNX2A6NKB5 2137 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms