RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 FRAS1Q86XX4 4008 aa13.58□□□□□ -0.24
TSPAN3-204ENST00000558394 RRHO14718 337 aa13.58□□□□□ -0.24
TSPAN3-204ENST00000558394 TPPPO94811 219 aa13.58□□□□□ -0.24
TSPAN3-204ENST00000558394 CNIH1O95406 144 aa13.58□□□□□ -0.24
TSPAN3-204ENST00000558394 TFAP2AP05549 437 aa13.58□□□□□ -0.24
TSPAN3-204ENST00000558394 CD2P06729 351 aa13.58□□□□□ -0.24
TSPAN3-204ENST00000558394 GTF2F2P13984 249 aa13.58□□□□□ -0.24
TSPAN3-204ENST00000558394 PPP3R1P63098 170 aa13.58□□□□□ -0.24
TSPAN3-204ENST00000558394 MOGAT2Q3SYC2 334 aa13.58□□□□□ -0.24
TSPAN3-204ENST00000558394 CIB1Q99828 191 aa13.58□□□□□ -0.24
TSPAN3-204ENST00000558394 PDCD1LG2Q9BQ51 273 aa13.58□□□□□ -0.24
TSPAN3-204ENST00000558394 FAM103A1Q9BTL3 118 aaKnown RBP13.58□□□□□ -0.24
TSPAN3-204ENST00000558394 TAS2R4Q9NYW5 299 aa13.58□□□□□ -0.24
TSPAN3-204ENST00000558394 ANKRD34BA5PLL1 514 aa13.57□□□□□ -0.24
TSPAN3-204ENST00000558394 GSTP1P09211 210 aaKnown RBP13.57□□□□□ -0.24
TSPAN3-204ENST00000558394 ZNF93P35789 620 aaPredicted RBP13.57□□□□□ -0.24
TSPAN3-204ENST00000558394 POLR2IP36954 125 aaKnown RBP13.57□□□□□ -0.24
TSPAN3-204ENST00000558394 SOX2P48431 317 aa13.57□□□□□ -0.24
TSPAN3-204ENST00000558394 SYNJ2BPP57105 145 aa13.57□□□□□ -0.24
TSPAN3-204ENST00000558394 SLC22A6Q4U2R8 563 aa13.57□□□□□ -0.24
TSPAN3-204ENST00000558394 LFNGQ8NES3 379 aa13.57□□□□□ -0.24
TSPAN3-204ENST00000558394 RGP1Q92546 391 aaPredicted RBP13.57□□□□□ -0.24
TSPAN3-204ENST00000558394 RDH12Q96NR8 316 aa13.57□□□□□ -0.24
TSPAN3-204ENST00000558394 ALG8Q9BVK2 526 aa13.57□□□□□ -0.24
TSPAN3-204ENST00000558394 TAF9BQ9HBM6 251 aa13.57□□□□□ -0.24
TSPAN3-204ENST00000558394 JPT1Q9UK76 154 aa13.57□□□□□ -0.24
TSPAN3-204ENST00000558394 A0A0G2JLM5 398 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 SNTNA6NMZ2 147 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 EGR2P11161 476 aaPredicted RBP13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 RCC1P18754 421 aaPredicted RBP13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 CD81P60033 236 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 ADARB1P78563 741 aaKnown RBP13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 MRPL28Q13084 256 aaKnown RBP13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 KLF5Q13887 457 aaPredicted RBP13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 GPR176Q14439 515 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 DDI2Q5TDH0 399 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 ZNF529Q6P280 563 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 FAM131AQ6UXB0 335 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 ZNF833PQ6ZTB9 187 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 ODF3L1Q8IXM7 274 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 CCDC197Q8NCU1 140 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 OR52L2PQ8NGH6 319 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 TRUB1Q8WWH5 349 aaKnown RBP13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 CLCC1Q96S66 551 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 THAP7Q9BT49 309 aaPredicted RBP13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 ST6GALNAC5Q9BVH7 336 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 GABARAPL1Q9H0R8 117 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 TMEM138Q9NPI0 162 aa13.56□□□□□ -0.24
TSPAN3-204ENST00000558394 HERC2O95714 4834 aa13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 SAA2-SAA4A0A096LPE2 208 aa13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 J3QRE1 110 aa13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 FCN1O00602 326 aa13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 BRI3O95415 125 aa13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 SAA2P0DJI9 122 aaPredicted RBP13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 T-ENOLP0DO92 83 aa13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 PPP1CCP36873 323 aaKnown RBP13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 OR3A3P47888 321 aa13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 GBX2P52951 348 aaPredicted RBP13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 GNMTQ14749 295 aa13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 ATP6AP1Q15904 470 aa13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 RAB12Q6IQ22 244 aa13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 LHFPL3Q86UP9 236 aa13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 SYS1Q8N2H4 156 aa13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 OR2AK2Q8NG84 335 aa13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 SLC2A8Q9NY64 477 aa13.55□□□□□ -0.24
TSPAN3-204ENST00000558394 CXorf65A6NEN9 183 aa13.54□□□□□ -0.24
TSPAN3-204ENST00000558394 H7C2Y5 167 aa13.54□□□□□ -0.24
TSPAN3-204ENST00000558394 CA11O75493 328 aa13.54□□□□□ -0.24
TSPAN3-204ENST00000558394 FSTP19883 344 aa13.54□□□□□ -0.24
TSPAN3-204ENST00000558394 MEDAGQ5VYS4 303 aa13.54□□□□□ -0.24
TSPAN3-204ENST00000558394 LINC00322Q6ZN03 302 aaPredicted RBP13.54□□□□□ -0.24
TSPAN3-204ENST00000558394 NEURL2Q9BR09 285 aa13.54□□□□□ -0.24
TSPAN3-204ENST00000558394 GABARAPL3Q9BY60 117 aa13.54□□□□□ -0.24
TSPAN3-204ENST00000558394 ISG20L2Q9H9L3 353 aaKnown RBP13.54□□□□□ -0.24
TSPAN3-204ENST00000558394 GAB2Q9UQC2 676 aa13.54□□□□□ -0.24
TSPAN3-204ENST00000558394 POMPQ9Y244 141 aa13.54□□□□□ -0.24
TSPAN3-204ENST00000558394 PEX16Q9Y5Y5 336 aa13.54□□□□□ -0.24
TSPAN3-204ENST00000558394 A0A1W2PP11 408 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 YPEL1O60688 119 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 FADS2O95864 444 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 MAS1P04201 325 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 FASP25445 335 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 BDKRB2P30411 391 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 MC5RP33032 325 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 ZNF562Q6V9R5 426 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 IL34Q6ZMJ4 242 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 POC5Q8NA72 575 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 GPR148Q8TDV2 347 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 TMEM106AQ96A25 262 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 YPEL2Q96QA6 119 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 SIGLEC8Q9NYZ4 499 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 PIPOXQ9P0Z9 390 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 RCC2Q9P258 522 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 PEMTQ9UBM1 199 aa13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 METTL1Q9UBP6 276 aaKnown RBP13.53□□□□□ -0.24
TSPAN3-204ENST00000558394 IZUMO1RA6ND01 250 aa13.52□□□□□ -0.25
TSPAN3-204ENST00000558394 OR5H14A6NHG9 310 aa13.52□□□□□ -0.25
TSPAN3-204ENST00000558394 H3BUA1 57 aa13.52□□□□□ -0.25
TSPAN3-204ENST00000558394 SLC22A1O15245 554 aa13.52□□□□□ -0.25
TSPAN3-204ENST00000558394 GYG2O15488 501 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms