RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 KCNJ8Q15842 424 aa16.87■□□□□ 0.29
SNRPA1-205ENST00000558036 LRRC10Q5BKY1 277 aa16.87■□□□□ 0.29
SNRPA1-205ENST00000558036 METTL8Q9H825 291 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-205ENST00000558036 CLN8Q9UBY8 286 aa16.87■□□□□ 0.29
SNRPA1-205ENST00000558036 TENM4Q6N022 2769 aa16.86■□□□□ 0.29
SNRPA1-205ENST00000558036 ST8SIA5O15466 376 aa16.86■□□□□ 0.29
SNRPA1-205ENST00000558036 PPIHO43447 177 aaKnown RBP16.86■□□□□ 0.29
SNRPA1-205ENST00000558036 MMP23AO75900 390 aa16.86■□□□□ 0.29
SNRPA1-205ENST00000558036 FAM219AQ8IW50 185 aa16.86■□□□□ 0.29
SNRPA1-205ENST00000558036 BVESQ8NE79 360 aa16.86■□□□□ 0.29
SNRPA1-205ENST00000558036 OR51H1Q8NH63 302 aa16.86■□□□□ 0.29
SNRPA1-205ENST00000558036 NCOR1P1Q9H4R4 102 aa16.86■□□□□ 0.29
SNRPA1-205ENST00000558036 PLSCR3Q9NRY6 295 aa16.86■□□□□ 0.29
SNRPA1-205ENST00000558036 KAAG1Q9UBP8 84 aa16.86■□□□□ 0.29
SNRPA1-205ENST00000558036 CSMD2Q7Z408 3487 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 A0A0B4J2A0 478 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 HLA-GP17693 338 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 RND3P61587 244 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 LRRC37A5PQ49AS3 106 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 FAM185AQ8N0U4 392 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 DRAM1Q8N682 238 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 LHFPL5Q8TAF8 219 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 C5orf30Q96GV9 206 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 ABHD14BQ96IU4 210 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 SHPKQ9UHJ6 478 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 PSG11Q9UQ72 335 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 F2RL2O00254 374 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 NDUFA2O43678 99 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 CLDN1O95832 211 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 CCL3L1P16619 93 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 TMEM200BQ69YZ2 307 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 MSI2Q96DH6 328 aaKnown RBP16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 OR10C1Q96KK4 312 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 NARFLQ9H6Q4 476 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 RANBP3Q9H6Z4 567 aaPredicted RBP16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 RAB18Q9NP72 206 aa16.85■□□□□ 0.29
SNRPA1-205ENST00000558036 hADV38S2A0JD32 116 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 NFYBP25208 207 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 MORN2Q502X0 79 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 PRAMEF5Q5TYX0 476 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 LYZL2Q7Z4W2 148 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 HYLS1Q96M11 299 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 SPOCK3Q9BQ16 436 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 SUCNR1Q9BXA5 334 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 TOLLIPQ9H0E2 274 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 JPT1Q9UK76 154 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 ZNF134P52741 427 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 BTNL3Q6UXE8 466 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 LIAT1Q6ZQX7 453 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 DRAXINQ8NBI3 349 aaPredicted RBP16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 TMEM222Q9H0R3 208 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 PLEKHF2Q9H8W4 249 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 UBE2J1Q9Y385 318 aaPredicted RBP16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 LINC00312Q9Y6C7 94 aa16.84■□□□□ 0.29
SNRPA1-205ENST00000558036 CELSR2Q9HCU4 2923 aa16.83■□□□□ 0.29
SNRPA1-205ENST00000558036 A0A1W2PPE3 182 aa16.83■□□□□ 0.28
SNRPA1-205ENST00000558036 CENPEQ02224 2701 aa16.83■□□□□ 0.28
SNRPA1-205ENST00000558036 LAMTOR1Q6IAA8 161 aa16.83■□□□□ 0.28
SNRPA1-205ENST00000558036 GSG1LQ6UXU4 331 aa16.83■□□□□ 0.28
SNRPA1-205ENST00000558036 CORO2AQ92828 525 aa16.83■□□□□ 0.28
SNRPA1-205ENST00000558036 AGMATQ9BSE5 352 aa16.83■□□□□ 0.28
SNRPA1-205ENST00000558036 SLC31A2O15432 143 aa16.82■□□□□ 0.28
SNRPA1-205ENST00000558036 ZNF16P17020 682 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-205ENST00000558036 F2RP25116 425 aa16.82■□□□□ 0.28
SNRPA1-205ENST00000558036 MRPS11P82912 194 aaKnown RBP16.82■□□□□ 0.28
SNRPA1-205ENST00000558036 TMEM268Q5VZI3 342 aa16.82■□□□□ 0.28
SNRPA1-205ENST00000558036 ZNF645Q8N7E2 425 aa16.82■□□□□ 0.28
SNRPA1-205ENST00000558036 DSCAML1Q8TD84 2053 aa16.82■□□□□ 0.28
SNRPA1-205ENST00000558036 ZNF729A6NN14 1252 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-205ENST00000558036 F12P00748 615 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-205ENST00000558036 LINC00205P59089 165 aa16.82■□□□□ 0.28
SNRPA1-205ENST00000558036 ZNF841Q6ZN19 808 aa16.82■□□□□ 0.28
SNRPA1-205ENST00000558036 PPP1R1CQ8WVI7 109 aa16.82■□□□□ 0.28
SNRPA1-205ENST00000558036 CHODLQ9H9P2 273 aa16.82■□□□□ 0.28
SNRPA1-205ENST00000558036 FBN2P35556 2912 aa16.82■□□□□ 0.28
SNRPA1-205ENST00000558036 YPEL1O60688 119 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 S100GP29377 79 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 MEF2CQ06413 473 aaPredicted RBP16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 GGNBP1Q5YKI7 109 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 SLC35G3Q8N808 338 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 RAB1CQ92928 201 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 TIMD4Q96H15 378 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 YPEL2Q96QA6 119 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 GFOD1Q9NXC2 390 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 IDI2-AS1Q9NZ38 188 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 GSKIPQ9P0R6 139 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 HSPB11Q9Y547 144 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 TRAV14DV4A0A0A6YYC5 116 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 TLE4Q04727 773 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 SRSF4Q08170 494 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 LGI3Q8N145 548 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 C9orf62Q8N4C0 152 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 AKR1E2Q96JD6 320 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 C18orf12Q96KH6 178 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 ZNF714Q96N38 554 aa16.81■□□□□ 0.28
SNRPA1-205ENST00000558036 H0Y980 276 aa16.8■□□□□ 0.28
SNRPA1-205ENST00000558036 FSTL3O95633 263 aa16.8■□□□□ 0.28
SNRPA1-205ENST00000558036 GNG10P50151 68 aa16.8■□□□□ 0.28
SNRPA1-205ENST00000558036 EFNA4P52798 201 aa16.8■□□□□ 0.28
SNRPA1-205ENST00000558036 LINC00574Q9H8X3 128 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms