RNA–Protein interactions for RNA: ENST00000557958.1

LDLR-206, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 1,881 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-206ENST00000557958 DIDO1Q9BTC0 2240 aaKnown RBP14.08□□□□□ -0.16
LDLR-206ENST00000557958 C17orf100A8MU93 164 aa14.08□□□□□ -0.16
LDLR-206ENST00000557958 VDAC1P21796 283 aa14.08□□□□□ -0.16
LDLR-206ENST00000557958 EDDM3AQ14507 147 aa14.08□□□□□ -0.16
LDLR-206ENST00000557958 MSMO1Q15800 293 aa14.08□□□□□ -0.16
LDLR-206ENST00000557958 BEX5Q5H9J7 111 aa14.08□□□□□ -0.16
LDLR-206ENST00000557958 NCMAPQ5T1S8 102 aa14.08□□□□□ -0.16
LDLR-206ENST00000557958 OR1L1Q8NH94 360 aa14.08□□□□□ -0.16
LDLR-206ENST00000557958 LHFPL5Q8TAF8 219 aa14.08□□□□□ -0.16
LDLR-206ENST00000557958 NCOR1P1Q9H4R4 102 aa14.08□□□□□ -0.16
LDLR-206ENST00000557958 PLEKHA2Q9HB19 425 aa14.08□□□□□ -0.16
LDLR-206ENST00000557958 LSM5Q9Y4Y9 91 aaKnown RBP14.08□□□□□ -0.16
LDLR-206ENST00000557958 E5RGE8 158 aa14.07□□□□□ -0.16
LDLR-206ENST00000557958 K7EPK0 472 aa14.07□□□□□ -0.16
LDLR-206ENST00000557958 TAAR5O14804 337 aa14.07□□□□□ -0.16
LDLR-206ENST00000557958 ST8SIA3O43173 380 aa14.07□□□□□ -0.16
LDLR-206ENST00000557958 TNFSF12O43508 249 aa14.07□□□□□ -0.16
LDLR-206ENST00000557958 FGF2P09038 288 aa14.07□□□□□ -0.16
LDLR-206ENST00000557958 OR8U9P0C7N5 309 aa14.07□□□□□ -0.16
LDLR-206ENST00000557958 MUC1P15941 1255 aaPredicted RBP14.07□□□□□ -0.16
LDLR-206ENST00000557958 EIF5AP63241 154 aaKnown RBP14.07□□□□□ -0.16
LDLR-206ENST00000557958 HOXA4Q00056 320 aaPredicted RBP14.07□□□□□ -0.16
LDLR-206ENST00000557958 SELENOHQ8IZQ5 122 aaKnown RBP14.07□□□□□ -0.16
LDLR-206ENST00000557958 ZNF808Q8N4W9 903 aaPredicted RBP14.07□□□□□ -0.16
LDLR-206ENST00000557958 FAM71E2Q8N5Q1 922 aa14.07□□□□□ -0.16
LDLR-206ENST00000557958 OR8U1Q8NH10 309 aa14.07□□□□□ -0.16
LDLR-206ENST00000557958 ARL11Q969Q4 196 aa14.07□□□□□ -0.16
LDLR-206ENST00000557958 ABHD14BQ96IU4 210 aa14.07□□□□□ -0.16
LDLR-206ENST00000557958 CXorf58Q96LI9 332 aa14.07□□□□□ -0.16
LDLR-206ENST00000557958 PLEKHF2Q9H8W4 249 aa14.07□□□□□ -0.16
LDLR-206ENST00000557958 NSG2Q9Y328 171 aa14.07□□□□□ -0.16
LDLR-206ENST00000557958 IGHV3OR15-7A0A075B7D8 119 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 ODAMA1E959 279 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 K7N7A8 449 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 CD3EP07766 207 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 HTD2P86397 168 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 TFF3Q07654 80 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 GNMTQ14749 295 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 C1orf87Q8N0U7 546 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 ZNF645Q8N7E2 425 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 OR13A1Q8NGR1 328 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 OR51H1Q8NH63 302 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 STOML3Q8TAV4 291 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 UBALD1Q8TB05 177 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 LINC00052Q96N35 136 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 OR6C3Q9NZP0 311 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.06□□□□□ -0.16
LDLR-206ENST00000557958 MBPP02686 304 aaPredicted RBP14.06□□□□□ -0.16
LDLR-206ENST00000557958 TPT1P13693 172 aaKnown RBP14.06□□□□□ -0.16
LDLR-206ENST00000557958 SPRNQ5BIV9 151 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 RRNAD1Q96FB5 475 aaKnown RBP14.06□□□□□ -0.16
LDLR-206ENST00000557958 OR2S2Q9NQN1 319 aa14.06□□□□□ -0.16
LDLR-206ENST00000557958 CADP27708 2225 aa14.05□□□□□ -0.16
LDLR-206ENST00000557958 TFF1P04155 84 aa14.05□□□□□ -0.16
LDLR-206ENST00000557958 PVALBP20472 110 aaPredicted RBP14.05□□□□□ -0.16
LDLR-206ENST00000557958 CD80P33681 288 aa14.05□□□□□ -0.16
LDLR-206ENST00000557958 EDARADDQ8WWZ3 215 aa14.05□□□□□ -0.16
LDLR-206ENST00000557958 NEUROG1Q92886 237 aa14.05□□□□□ -0.16
LDLR-206ENST00000557958 SDSLQ96GA7 329 aa14.05□□□□□ -0.16
LDLR-206ENST00000557958 FAM234AQ9H0X4 552 aa14.05□□□□□ -0.16
LDLR-206ENST00000557958 SLC25A32Q9H2D1 315 aa14.05□□□□□ -0.16
LDLR-206ENST00000557958 SAP30LQ9HAJ7 183 aa14.05□□□□□ -0.16
LDLR-206ENST00000557958 POMT1Q9Y6A1 747 aa14.05□□□□□ -0.16
LDLR-206ENST00000557958 ADGRG4Q8IZF6 3080 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 CLEC18AA5D8T8 446 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 SHISA9B4DS77 424 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 RPL12P30050 165 aaKnown RBP14.04□□□□□ -0.16
LDLR-206ENST00000557958 SSTR5P35346 364 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 CCL8P80075 99 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 STUMQ69YW2 141 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 PDZD9Q8IXQ8 264 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 DRAM1Q8N682 238 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 TPRX1Q8N7U7 411 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 CLEC18CQ8NCF0 446 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 OR4D5Q8NGN0 318 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 RNASE11Q8TAA1 199 aaKnown RBP14.04□□□□□ -0.16
LDLR-206ENST00000557958 C14orf79Q96F83 325 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 MS4A5Q9H3V2 200 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 ZNF665Q9H7R5 613 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 DYNLRB1Q9NP97 96 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 EPG5Q9HCE0 2579 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 NKX6-3A6NJ46 265 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 CYB5R3P00387 301 aaPredicted RBP14.04□□□□□ -0.16
LDLR-206ENST00000557958 PLAUP00749 431 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 SLC25A6P12236 298 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 AGAP20933 346 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 NKX2-1P43699 371 aaPredicted RBP14.04□□□□□ -0.16
LDLR-206ENST00000557958 EDDM3BP56851 147 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 CATR1Q13166 79 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 CR1LQ2VPA4 569 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 TEX36Q5VZQ5 186 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 ZNRF1Q8ND25 227 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 OR52L2PQ8NGH6 319 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 OR52M1Q8NGK5 317 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 OR2D2Q9H210 308 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 JPT1Q9UK76 154 aa14.04□□□□□ -0.16
LDLR-206ENST00000557958 CHD3Q12873 2000 aaKnown RBP14.03□□□□□ -0.16
LDLR-206ENST00000557958 MSGN1A6NI15 193 aa14.03□□□□□ -0.16
LDLR-206ENST00000557958 ADAM20O43506 726 aa14.03□□□□□ -0.16
LDLR-206ENST00000557958 IGLV2-14P01704 120 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms