RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 MS4A15Q8N5U1 240 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 OR2AK2Q8NG84 335 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 PHYHIPQ92561 330 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 CYYR1Q96J86 154 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 B9D2Q9BPU9 175 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 TMED9Q9BVK6 235 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 CHMP1AQ9HD42 196 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-235ENST00000557740 FKBP14Q9NWM8 211 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 STEAP1Q9UHE8 339 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 LRRC42Q9Y546 428 aa11.46□□□□□ -0.57
SHMT2-235ENST00000557740 CASQ2O14958 399 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-235ENST00000557740 YPEL1O60688 119 aa11.45□□□□□ -0.58
SHMT2-235ENST00000557740 RAMP3O60896 148 aa11.45□□□□□ -0.58
SHMT2-235ENST00000557740 VSIG8P0DPA2 414 aa11.45□□□□□ -0.58
SHMT2-235ENST00000557740 PSMB8P28062 276 aa11.45□□□□□ -0.58
SHMT2-235ENST00000557740 RPS27AP62979 156 aaKnown RBP11.45□□□□□ -0.58
SHMT2-235ENST00000557740 C6orf141Q5SZD1 244 aa11.45□□□□□ -0.58
SHMT2-235ENST00000557740 FAM27D1Q5T7N8 215 aa11.45□□□□□ -0.58
SHMT2-235ENST00000557740 C9orf66Q5T8R8 295 aa11.45□□□□□ -0.58
SHMT2-235ENST00000557740 OR10K2Q6IF99 312 aa11.45□□□□□ -0.58
SHMT2-235ENST00000557740 KCNG3Q8TAE7 436 aa11.45□□□□□ -0.58
SHMT2-235ENST00000557740 IL1F10Q8WWZ1 152 aa11.45□□□□□ -0.58
SHMT2-235ENST00000557740 YPEL2Q96QA6 119 aa11.45□□□□□ -0.58
SHMT2-235ENST00000557740 SULT4A1Q9BR01 284 aa11.45□□□□□ -0.58
SHMT2-235ENST00000557740 CHCHD6Q9BRQ6 235 aa11.45□□□□□ -0.58
SHMT2-235ENST00000557740 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.45□□□□□ -0.58
SHMT2-235ENST00000557740 PARP11Q9NR21 331 aa11.45□□□□□ -0.58
SHMT2-235ENST00000557740 SAA2-SAA4A0A096LPE2 208 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 NBR2O15453 112 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 HLA-DRB1P01911 266 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 CDK1P06493 297 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 SAA2P0DJI9 122 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-235ENST00000557740 HTR2CP28335 458 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 OR3A3P47888 321 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 HMGN3Q15651 99 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 HSD17B12Q53GQ0 312 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 C1orf100Q5SVJ3 147 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 ZNF833PQ6ZTB9 187 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 MOB1BQ7L9L4 216 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 C6orf201Q7Z4U5 140 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 C5orf24Q7Z6I8 188 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 LRRTM1Q86UE6 522 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 ODF3L1Q8IXM7 274 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 SVOPQ8N4V2 548 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 SETD6Q8TBK2 473 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 NABP2Q9BQ15 211 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 FAAP24Q9BTP7 215 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 OR51J1Q9H342 316 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 KIAA1456Q9P272 454 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 WSB1Q9Y6I7 421 aa11.44□□□□□ -0.58
SHMT2-235ENST00000557740 SEC14L6B5MCN3 397 aa11.43□□□□□ -0.58
SHMT2-235ENST00000557740 PTGES3LE9PB15 166 aa11.43□□□□□ -0.58
SHMT2-235ENST00000557740 ATP6V0E1O15342 81 aa11.43□□□□□ -0.58
SHMT2-235ENST00000557740 CNTFRP26992 372 aa11.43□□□□□ -0.58
SHMT2-235ENST00000557740 SPHARQ15513 63 aa11.43□□□□□ -0.58
SHMT2-235ENST00000557740 C5orf64Q2M2E5 130 aa11.43□□□□□ -0.58
SHMT2-235ENST00000557740 LY6G6FQ5SQ64 297 aa11.43□□□□□ -0.58
SHMT2-235ENST00000557740 RNLSQ5VYX0 342 aa11.43□□□□□ -0.58
SHMT2-235ENST00000557740 NICN1Q9BSH3 213 aa11.43□□□□□ -0.58
SHMT2-235ENST00000557740 IFI27L2Q9H2X8 130 aa11.43□□□□□ -0.58
SHMT2-235ENST00000557740 KCNK15Q9H427 330 aa11.43□□□□□ -0.58
SHMT2-235ENST00000557740 SCN3BQ9NY72 215 aa11.43□□□□□ -0.58
SHMT2-235ENST00000557740 TRAV41A0A0B4J266 112 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 G3V318 75 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 ST8SIA5O15466 376 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 BPNT1O95861 308 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 OR8U8P0C7N1 319 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 SRMP19623 302 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 BLVRBP30043 206 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-235ENST00000557740 UNC119Q13432 240 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 FHL3Q13643 280 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 MED22Q15528 200 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 LIN54Q6MZP7 749 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 FAM71F2Q6NXP2 309 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 CEACAM19Q7Z692 300 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 OR11H1Q8NG94 326 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 OR6M1Q8NGM8 313 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 MYOZ3Q8TDC0 251 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 UFD1Q92890 307 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 RITA1Q96K30 269 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 TM2D1Q9BX74 207 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 ANKRD60Q9BZ19 345 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 PLEKHJ1Q9NW61 149 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 PIPOXQ9P0Z9 390 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 VSIG4Q9Y279 399 aa11.42□□□□□ -0.58
SHMT2-235ENST00000557740 IGHV7-81A0A0B4J1V7 117 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 RAB29O14966 203 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 SLC22A1O15245 554 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 NAPSAO96009 420 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 UCHL1P09936 223 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 PPIFP30405 207 aaKnown RBP11.41□□□□□ -0.58
SHMT2-235ENST00000557740 ECI1P42126 302 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 PLGLAQ15195 96 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 ECSCRQ19T08 205 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 ZNF260Q3ZCT1 412 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 FAM131AQ6UXB0 335 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 NPBQ8NG41 125 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 UBE2E2Q96LR5 201 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 OR5B12Q96R08 314 aa11.41□□□□□ -0.58
SHMT2-235ENST00000557740 PRR25Q96S07 402 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms