RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 RBM38Q9H0Z9 239 aaKnown RBP11.06□□□□□ -0.64
SHMT2-234ENST00000557703 ESM1Q9NQ30 184 aa11.06□□□□□ -0.64
SHMT2-234ENST00000557703 SLC23A1Q9UHI7 598 aa11.06□□□□□ -0.64
SHMT2-234ENST00000557703 GAB2Q9UQC2 676 aa11.06□□□□□ -0.64
SHMT2-234ENST00000557703 CCDC160A6NGH7 325 aa11.05□□□□□ -0.64
SHMT2-234ENST00000557703 RAB29O14966 203 aa11.05□□□□□ -0.64
SHMT2-234ENST00000557703 LANCL1O43813 399 aa11.05□□□□□ -0.64
SHMT2-234ENST00000557703 SLC22A5O76082 557 aa11.05□□□□□ -0.64
SHMT2-234ENST00000557703 SCTP09683 121 aa11.05□□□□□ -0.64
SHMT2-234ENST00000557703 FAM106CPP0CH98 169 aa11.05□□□□□ -0.64
SHMT2-234ENST00000557703 CEACAM6P40199 344 aa11.05□□□□□ -0.64
SHMT2-234ENST00000557703 MRPS10P82664 201 aaKnown RBP11.05□□□□□ -0.64
SHMT2-234ENST00000557703 PRB3Q04118 309 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-234ENST00000557703 LTC4SQ16873 150 aa11.05□□□□□ -0.64
SHMT2-234ENST00000557703 CT45A1Q5HYN5 189 aa11.05□□□□□ -0.64
SHMT2-234ENST00000557703 HOGA1Q86XE5 327 aa11.05□□□□□ -0.64
SHMT2-234ENST00000557703 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-234ENST00000557703 CT45A3Q8NHU0 189 aa11.05□□□□□ -0.64
SHMT2-234ENST00000557703 ST6GALNAC6Q969X2 333 aa11.05□□□□□ -0.64
SHMT2-234ENST00000557703 S1PR3Q99500 378 aa11.05□□□□□ -0.64
SHMT2-234ENST00000557703 HILPDAQ9Y5L2 63 aa11.05□□□□□ -0.64
SHMT2-234ENST00000557703 MDFIC2A0A1B0GVS7 189 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 FAM90A9PA6NNJ1 464 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 FAM25AB3EWG3 89 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 FAM25CB3EWG5 89 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 FAM25GB3EWG6 89 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 M0QZK8 103 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 HSD17B6O14756 317 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 IGHV4-59P01825 116 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 ELK1P19419 428 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 CD1BP29016 333 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 GNG10P50151 68 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 ZNF134P52741 427 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 TAS2R20P59543 309 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 FOXL1Q12952 345 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 PLA1AQ53H76 456 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 LDLRAD2Q5SZI1 272 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 Q6ZPA2 131 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 BEST4Q8NFU0 473 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 OR52L2PQ8NGH6 319 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 C17orf50Q8WW18 174 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 AGMATQ9BSE5 352 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 ST6GALNAC5Q9BVH7 336 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 CHIAQ9BZP6 476 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 SLIRPQ9GZT3 109 aaKnown RBP11.04□□□□□ -0.64
SHMT2-234ENST00000557703 NXF2Q9GZY0 626 aaKnown RBP11.04□□□□□ -0.64
SHMT2-234ENST00000557703 MMP27Q9H306 513 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 ANXA10Q9UJ72 324 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 TCF19Q9Y242 345 aa11.04□□□□□ -0.64
SHMT2-234ENST00000557703 SOX21Q9Y651 276 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-234ENST00000557703 IGHV3-43A0A0B4J1X8 118 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 FAM172BPA6NC97 362 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 H3BUX3 64 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 RGS5O15539 181 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 HPGDSO60760 199 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 NDUFA7O95182 113 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 HLA-DQB1P01920 261 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 EIF4EP06730 217 aaKnown RBP11.03□□□□□ -0.64
SHMT2-234ENST00000557703 GSTT2P0CG29 244 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 GSTT2BP0CG30 244 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 IGHV3-43DP0DP04 118 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 HKR1P10072 659 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 NAT1P18440 290 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 PPP1CCP36873 323 aaKnown RBP11.03□□□□□ -0.64
SHMT2-234ENST00000557703 COMPP49747 757 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-234ENST00000557703 TAGLNQ01995 201 aaKnown RBP11.03□□□□□ -0.64
SHMT2-234ENST00000557703 SSBP1Q04837 148 aaKnown RBP11.03□□□□□ -0.64
SHMT2-234ENST00000557703 TGIF2LXQ8IUE1 241 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 OR10V1Q8NGI7 309 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 PIFOQ8TCI5 191 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 NUDCD2Q8WVJ2 157 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 RTN4IP1Q8WWV3 396 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-234ENST00000557703 GCDHQ92947 438 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-234ENST00000557703 LEAP2Q969E1 77 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 GINS4Q9BRT9 223 aa11.03□□□□□ -0.64
SHMT2-234ENST00000557703 RANBP3Q9H6Z4 567 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-234ENST00000557703 TMEM89A2RUT3 159 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 RNF212BA8MTL3 300 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 SSX5O60225 188 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 GPR137BO60478 399 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 TAS2R46P59540 309 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 ARPC4P59998 168 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 EBI3Q14213 229 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 HERPUD1Q15011 391 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 C11orf88Q6PI97 169 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 LYG1Q8N1E2 194 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 DYNAPQ8N1N2 210 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 OR5AP2Q8NGF4 316 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 OR8H1Q8NGG4 311 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 UBALD1Q8TB05 177 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 GPX8Q8TED1 209 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 C11orf54Q9H0W9 315 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-234ENST00000557703 IFT46Q9NQC8 304 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 NECAP2Q9NVZ3 263 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 RDH8Q9NYR8 311 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 ZNF230Q9UIE0 474 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-234ENST00000557703 ZNF107Q9UII5 783 aaPredicted RBP11.02□□□□□ -0.65
SHMT2-234ENST00000557703 ZNF221Q9UK13 617 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 ANAPC10Q9UM13 185 aa11.02□□□□□ -0.65
SHMT2-234ENST00000557703 MMP24Q9Y5R2 645 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms