RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 NUBP1P53384 320 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 FZD5Q13467 585 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 TOX2Q96NM4 488 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 AUP1Q9Y679 476 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 LILRA5A6NI73 299 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 KLF9Q13886 244 aaPredicted RBP7.78□□□□□ -1.16
SYNE3-205ENST00000557275 PRNTQ86SH4 94 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 OR4X2Q8NGF9 303 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 SDHCQ99643 169 aaPredicted RBP7.78□□□□□ -1.16
SYNE3-205ENST00000557275 QTRT1Q9BXR0 403 aaKnown RBP7.78□□□□□ -1.16
SYNE3-205ENST00000557275 MMP25Q9NPA2 562 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 RGPD3A6NKT7 1758 aaPredicted RBP7.78□□□□□ -1.16
SYNE3-205ENST00000557275 MPZL1O95297 269 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 HPRT1P00492 218 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 TRA2AQ13595 282 aaKnown RBP eCLIP7.78□□□□□ -1.16
SYNE3-205ENST00000557275 CEACAM16Q2WEN9 425 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 ALKBH3Q96Q83 286 aaPredicted RBP7.78□□□□□ -1.16
SYNE3-205ENST00000557275 A0A0B4J2E0 115 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 A0A1B0GX12 115 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 PPYP01298 95 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 ASAH2BP0C7U1 165 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 ZNF252P-AS1Q0IIN9 211 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 C1orf185Q5T7R7 199 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 LDLRAD3Q86YD5 345 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 GFRALQ6UXV0 394 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 ZNF714Q96N38 554 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 DPRXA6NFQ7 191 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 F11P03951 625 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 ZNF880Q6PDB4 577 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 ISG20L2Q9H9L3 353 aaKnown RBP7.78□□□□□ -1.16
SYNE3-205ENST00000557275 SBF1O95248 1867 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 ZFPL1O95159 310 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 MVDP53602 400 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 ZNF324BQ6AW86 544 aaPredicted RBP7.78□□□□□ -1.16
SYNE3-205ENST00000557275 TMEM86BQ8N661 226 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 MTCH2Q9Y6C9 303 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 CYB561D1Q8N8Q1 229 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 TMEM30AQ9NV96 361 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 AGAP20933 346 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 HOXD3P31249 432 aaPredicted RBP7.78□□□□□ -1.16
SYNE3-205ENST00000557275 GALNSP34059 522 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 BCDIN3DQ7Z5W3 292 aaKnown RBP7.78□□□□□ -1.16
SYNE3-205ENST00000557275 PRSS21Q9Y6M0 314 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 SPRY1O43609 319 aaPredicted RBP7.78□□□□□ -1.16
SYNE3-205ENST00000557275 CBLN2Q8IUK8 224 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 SLC37A2Q8TED4 501 aa7.78□□□□□ -1.16
SYNE3-205ENST00000557275 SLC25A35Q3KQZ1 300 aa7.77□□□□□ -1.16
SYNE3-205ENST00000557275 SP6Q3SY56 376 aa7.77□□□□□ -1.16
SYNE3-205ENST00000557275 DNASE2BQ8WZ79 361 aa7.77□□□□□ -1.16
SYNE3-205ENST00000557275 LINC00052Q96N35 136 aa7.77□□□□□ -1.16
SYNE3-205ENST00000557275 IGHV3-9P01782 118 aa7.77□□□□□ -1.16
SYNE3-205ENST00000557275 LINC00470Q9BZP3 86 aa7.77□□□□□ -1.16
SYNE3-205ENST00000557275 V9GYH0 126 aa7.77□□□□□ -1.16
SYNE3-205ENST00000557275 TNRC6AQ8NDV7 1962 aaKnown RBP7.77□□□□□ -1.17
SYNE3-205ENST00000557275 PATJQ8NI35 1801 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 SNAI1O95863 264 aaPredicted RBP7.77□□□□□ -1.17
SYNE3-205ENST00000557275 SH2D5Q6ZV89 423 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 DTX1Q86Y01 620 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 ISOC2Q96AB3 205 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 GPR82Q96P67 336 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 ZNF688P0C7X2 276 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 CKS1BP61024 79 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 ZNF562Q6V9R5 426 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 SF3B5Q9BWJ5 86 aaKnown RBP7.77□□□□□ -1.17
SYNE3-205ENST00000557275 SFXN3Q9BWM7 321 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 DPH3Q96FX2 82 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 PLSCR3Q9NRY6 295 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 ALG1L2C9J202 215 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 APOMO95445 188 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 DUSP2Q05923 314 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 ASB16Q96NS5 453 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 K7N7A8 449 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 OR3A4PP47883 348 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 ZNF146Q15072 292 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 SERGEFQ9UGK8 458 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 H0Y980 276 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 UPK1AO00322 258 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 TMPRSS2O15393 492 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 PAGE4O60829 102 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 HTN1P15515 57 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 PRICKLE4Q2TBC4 344 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 RNF182Q8N6D2 247 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 MRPL18Q9H0U6 180 aaKnown RBP7.77□□□□□ -1.17
SYNE3-205ENST00000557275 DHCR7Q9UBM7 475 aaKnown RBP7.77□□□□□ -1.17
SYNE3-205ENST00000557275 HSF4Q9ULV5 492 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 J3QR06 171 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 NPFFO15130 113 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 ABHD3Q8WU67 409 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 ACACBO00763 2458 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 ANOS1P23352 680 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 CRYBB2P43320 205 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 ASCL4Q6XD76 172 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 C4orf45Q96LM5 186 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 DOCK5Q9H7D0 1870 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 IGLV3-10A0A075B6K4 115 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 RTP5Q14D33 572 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 RNFT1Q5M7Z0 435 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 C9orf62Q8N4C0 152 aa7.77□□□□□ -1.17
SYNE3-205ENST00000557275 MRPL43Q8N983 215 aaKnown RBP7.77□□□□□ -1.17
SYNE3-205ENST00000557275 RGP1Q92546 391 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms