RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 HLA-HP01893 362 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 F2RP25116 425 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 RANP62826 216 aaKnown RBP10.72□□□□□ -0.69
APEX1-216ENST00000557159 DAZAP2Q15038 168 aaPredicted RBP10.72□□□□□ -0.69
APEX1-216ENST00000557159 SHISA6Q6ZSJ9 500 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 ARL6IP6Q8N6S5 226 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 DEFB124Q8NES8 71 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 ATG101Q9BSB4 218 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 WDR61Q9GZS3 305 aaKnown RBP10.72□□□□□ -0.69
APEX1-216ENST00000557159 ZNF442Q9H7R0 627 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 CHODLQ9H9P2 273 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 PLEK2Q9NYT0 353 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 NAGKQ9UJ70 344 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 POLR3KQ9Y2Y1 108 aaPredicted RBP10.72□□□□□ -0.69
APEX1-216ENST00000557159 WDFY3Q8IZQ1 3526 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 TRBV6-6A0A0A6YYG2 114 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 TRBV11-1A0A0K0K1C0 115 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 NPIPA2E9PIF3 369 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 OR3A1P47881 315 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 PSMB3P49720 205 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 ANKRD39Q53RE8 183 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 SPIN3Q5JUX0 258 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 C20orf196Q8IYI0 205 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 SAXO1Q8IYX7 474 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 PCGF1Q9BSM1 259 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 RSG1Q9BU20 258 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 RIMS4Q9H426 269 aaPredicted RBP10.72□□□□□ -0.69
APEX1-216ENST00000557159 PLK3Q9H4B4 646 aa10.72□□□□□ -0.69
APEX1-216ENST00000557159 MRPS18CQ9Y3D5 142 aaKnown RBP10.72□□□□□ -0.69
APEX1-216ENST00000557159 IGHV3-20A0A0C4DH32 117 aa10.71□□□□□ -0.69
APEX1-216ENST00000557159 FAM90A26D6RGX4 464 aa10.71□□□□□ -0.69
APEX1-216ENST00000557159 NTN3O00634 580 aaPredicted RBP10.71□□□□□ -0.69
APEX1-216ENST00000557159 PGLYRP1O75594 196 aaPredicted RBP10.71□□□□□ -0.69
APEX1-216ENST00000557159 ESDP10768 282 aa10.71□□□□□ -0.69
APEX1-216ENST00000557159 MDKP21741 143 aaPredicted RBP10.71□□□□□ -0.69
APEX1-216ENST00000557159 RPL15P61313 204 aaKnown RBP10.71□□□□□ -0.69
APEX1-216ENST00000557159 ZNF774Q6NX45 483 aa10.71□□□□□ -0.69
APEX1-216ENST00000557159 MRPL14Q6P1L8 145 aaKnown RBP10.71□□□□□ -0.69
APEX1-216ENST00000557159 SSX7Q7RTT5 188 aa10.71□□□□□ -0.69
APEX1-216ENST00000557159 GPR146Q96CH1 333 aa10.71□□□□□ -0.69
APEX1-216ENST00000557159 VSIRQ9H7M9 311 aa10.71□□□□□ -0.69
APEX1-216ENST00000557159 CBLN4Q9NTU7 201 aa10.71□□□□□ -0.69
APEX1-216ENST00000557159 FUT9Q9Y231 359 aa10.71□□□□□ -0.69
APEX1-216ENST00000557159 KIAA2026Q5HYC2 2103 aa10.71□□□□□ -0.7
APEX1-216ENST00000557159 KNTC1P50748 2209 aa10.71□□□□□ -0.7
APEX1-216ENST00000557159 CTXND1A0A1B0GTU2 59 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 hCG_38984A0A1B0GV85 526 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 OR6C6A6NF89 314 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 SYNGR2O43760 224 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 TNFSF13O75888 250 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 DKK1O94907 266 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 TIAF1O95411 115 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 G0S2P27469 103 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 ERVS71-1P61550 626 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 FOXL1Q12952 345 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 PHYHD1Q5SRE7 291 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 TMEM144Q7Z5S9 345 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 AGBL5Q8NDL9 886 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 MRPL30Q8TCC3 161 aaKnown RBP10.7□□□□□ -0.7
APEX1-216ENST00000557159 EXTL1Q92935 676 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 LHX4Q969G2 390 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 PARLQ9H300 379 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 SLC39A9Q9NUM3 307 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 ATP23Q9Y6H3 246 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 EPG5Q9HCE0 2579 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 LRRC3CA6NJW4 275 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 TMPRSS2O15393 492 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 MLNRO43193 412 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 YPEL1O60688 119 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 ELLP55199 621 aaPredicted RBP10.7□□□□□ -0.7
APEX1-216ENST00000557159 PAFAH1B2P68402 229 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 RSPO4Q2I0M5 234 aaPredicted RBP10.7□□□□□ -0.7
APEX1-216ENST00000557159 TMEM249Q2WGJ8 235 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 TEX43Q6ZNM6 134 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 C16orf47Q6ZP98 133 aaPredicted RBP10.7□□□□□ -0.7
APEX1-216ENST00000557159 OR1F12Q8NHA8 337 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 OR10J5Q8NHC4 309 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 TMEM37Q8WXS4 190 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 ZCCHC14Q8WYQ9 949 aaKnown RBP10.7□□□□□ -0.7
APEX1-216ENST00000557159 TAF15Q92804 592 aaKnown RBP eCLIP10.7□□□□□ -0.71e-7■■■■■ 28
APEX1-216ENST00000557159 YPEL2Q96QA6 119 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 MIEN1Q9BRT3 115 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 DEFB126Q9BYW3 111 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 DLL3Q9NYJ7 618 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 PXMP4Q9Y6I8 212 aa10.7□□□□□ -0.7
APEX1-216ENST00000557159 YLPM1P49750 1951 aaKnown RBP10.69□□□□□ -0.7
APEX1-216ENST00000557159 LOC102723996A0A087X1L8 192 aa10.69□□□□□ -0.7
APEX1-216ENST00000557159 IGKV1D-13A0A0B4J2D9 117 aa10.69□□□□□ -0.7
APEX1-216ENST00000557159 ZNF816-ZNF321PA0A0X1KG74 233 aa10.69□□□□□ -0.7
APEX1-216ENST00000557159 A0A1W2PPQ1 181 aa10.69□□□□□ -0.7
APEX1-216ENST00000557159 NPIPB11E5RHQ5 1161 aa10.69□□□□□ -0.7
APEX1-216ENST00000557159 IGKV1-13P0DP09 117 aa10.69□□□□□ -0.7
APEX1-216ENST00000557159 FGF8P55075 233 aaPredicted RBP10.69□□□□□ -0.7
APEX1-216ENST00000557159 GNB2P62879 340 aa10.69□□□□□ -0.7
APEX1-216ENST00000557159 MRPS11P82912 194 aaKnown RBP10.69□□□□□ -0.7
APEX1-216ENST00000557159 ATP6V1FQ16864 119 aa10.69□□□□□ -0.7
APEX1-216ENST00000557159 SPSB4Q96A44 273 aa10.69□□□□□ -0.7
APEX1-216ENST00000557159 METTL7AQ9H8H3 244 aa10.69□□□□□ -0.7
APEX1-216ENST00000557159 TRAV9-1A0A075B6T8 112 aa10.68□□□□□ -0.7
APEX1-216ENST00000557159 SPAARA0A1B0GVQ0 90 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms