RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 HTR2CP28335 458 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 REG1BP48304 166 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 AQP4P55087 323 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 ZNF816Q0VGE8 651 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-222ENST00000556768 LIPKQ5VXJ0 399 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 LAIR2Q6ISS4 152 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 C1QL4Q86Z23 238 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 TGIF2LXQ8IUE1 241 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 LINC00311Q8N616 119 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 TMEM104Q8NE00 496 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 SGCDQ92629 289 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 TMEM203Q969S6 136 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 URM1Q9BTM9 101 aaKnown RBP5.83□□□□□ -1.48
SCFD1-222ENST00000556768 TMEM59Q9BXS4 323 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 PLGRKTQ9HBL7 147 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 TAF9BQ9HBM6 251 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 C19orf73Q9NVV2 129 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 PLEKHJ1Q9NW61 149 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 NKX1-2Q9UD57 310 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-222ENST00000556768 IGHV3-43A0A0B4J1X8 118 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 A0A1W2PPI3 338 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 C12orf77C9JDV5 145 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 PIN1P1O15428 100 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 SC5DO75845 299 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 MOSP00540 346 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 IGHV3-43DP0DP04 118 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 ARSBP15848 533 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 RCC1P18754 421 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-222ENST00000556768 MYF6P23409 242 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 CD1BP29016 333 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 LOXL3P58215 753 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 SLC35A2P78381 396 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 MRPS15P82914 257 aaKnown RBP5.83□□□□□ -1.48
SCFD1-222ENST00000556768 UNQ9370/PRO34162Q6UXP9 181 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 SLC35E3Q7Z769 313 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 COMMD1Q8N668 190 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 OR51D1Q8NGF3 324 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 OR8H1Q8NGG4 311 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 OR6M1Q8NGM8 313 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 UBALD1Q8TB05 177 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 RTN4IP1Q8WWV3 396 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-222ENST00000556768 RASL11BQ9BPW5 248 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 ANKRD60Q9BZ19 345 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 RIMS4Q9H426 269 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-222ENST00000556768 CHMP1AQ9HD42 196 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-222ENST00000556768 TPSG1Q9NRR2 321 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 ZNF581Q9P0T4 197 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 STEAP1Q9UHE8 339 aa5.83□□□□□ -1.48
SCFD1-222ENST00000556768 NUDT19A8MXV4 375 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 G3V4G9 280 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 AP4M1O00189 453 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 RRP9O43818 475 aaKnown RBP5.82□□□□□ -1.48
SCFD1-222ENST00000556768 TNFRSF6BO95407 300 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 UCHL1P09936 223 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 BLVRBP30043 206 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-222ENST00000556768 SLC6A1P30531 599 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 VHLP40337 213 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 HTD2P86397 168 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 INSL4Q14641 139 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 SLC25A48Q6ZT89 311 aaKnown RBP5.82□□□□□ -1.48
SCFD1-222ENST00000556768 PRSS48Q7RTY5 328 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 GAPTQ8N292 157 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 OR2AK2Q8NG84 335 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 OR10V1Q8NGI7 309 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 WIPF2Q8TF74 440 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-222ENST00000556768 IL1F10Q8WWZ1 152 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 GHITMQ9H3K2 345 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 DUSP21Q9H596 190 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 ISYNA1Q9NPH2 558 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 ACOT13Q9NPJ3 140 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 ZFP57Q9NU63 452 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 JPT1Q9UK76 154 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 MGAT4AQ9UM21 535 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 NOTCH3Q9UM47 2321 aa5.82□□□□□ -1.48
SCFD1-222ENST00000556768 IGHV3-72A0A0B4J1Y9 119 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 SH2D7A6NKC9 451 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-222ENST00000556768 SLC22A1O15245 554 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 DUS4LO95620 317 aaKnown RBP5.81□□□□□ -1.48
SCFD1-222ENST00000556768 RPS27AP62979 156 aaKnown RBP5.81□□□□□ -1.48
SCFD1-222ENST00000556768 MLLT11Q13015 90 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-222ENST00000556768 TPBGQ13641 420 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 EBI3Q14213 229 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 DIAPH2-AS1Q14236 149 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 MORN2Q502X0 79 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 C1orf100Q5SVJ3 147 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 UTF1Q5T230 341 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 FAM27D1Q5T7N8 215 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 HIST2H2BDQ6DRA6 164 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 TEX38Q6PEX7 206 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 IZUMO2Q6UXV1 221 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 ZNF329Q86UD4 541 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 IZUMO1Q8IYV9 350 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 C5orf56Q8N8D9 126 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 OR1L1Q8NH94 360 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 SETD6Q8TBK2 473 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 CNBD2Q96M20 576 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 MGLLQ99685 303 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 FAAP24Q9BTP7 215 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 ABHD14AQ9BUJ0 271 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 GPR61Q9BZJ8 451 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms