RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 TSSC4Q9Y5U2 329 aaPredicted RBP4.25□□□□□ -1.73
SRP54-211ENST00000556445 V9GYS6 101 aa4.25□□□□□ -1.73
SRP54-211ENST00000556445 OTOGLQ3ZCN5 2332 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 MED13Q9UHV7 2174 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 PTPRBP23467 1997 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 C7orf66A4D0T2 115 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 F5H5K5 113 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 G3V4G9 280 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 SYNGR3O43761 229 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 ZNF780AO75290 641 aaPredicted RBP4.24□□□□□ -1.73
SRP54-211ENST00000556445 CEACAM4O75871 244 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 F10P00742 488 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 HCKP08631 526 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 AKAIN1P0CW23 69 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 ZNF32P17041 273 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 KLK2P20151 261 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 TBPP20226 339 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 PSMB1P20618 241 aaKnown RBP4.24□□□□□ -1.73
SRP54-211ENST00000556445 CRYGSP22914 178 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 TAS2R19P59542 299 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 RRAS2P62070 204 aaPredicted RBP4.24□□□□□ -1.73
SRP54-211ENST00000556445 TGFBR3Q03167 851 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 OTPQ5XKR4 325 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 STEAP1BQ6NZ63 245 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 C18orf65Q6ZTR6 163 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 RFPL4BQ6ZWI9 263 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 LYPD6Q86Y78 171 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 FTMTQ8N4E7 242 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 TMEM229BQ8NBD8 167 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 NECAP1Q8NC96 275 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 OR5M9Q8NGP3 310 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 OR1B1Q8NGR6 318 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 ABHD3Q8WU67 409 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 PHLDA1Q8WV24 401 aaPredicted RBP4.24□□□□□ -1.73
SRP54-211ENST00000556445 SLC7A6Q92536 515 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 ADAT3Q96EY9 351 aaPredicted RBP4.24□□□□□ -1.73
SRP54-211ENST00000556445 GMPPAQ96IJ6 420 aaPredicted RBP4.24□□□□□ -1.73
SRP54-211ENST00000556445 ALKBH3Q96Q83 286 aaPredicted RBP4.24□□□□□ -1.73
SRP54-211ENST00000556445 OR2H1Q9GZK4 316 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 CHST5Q9GZS9 411 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 MED28Q9H204 178 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 MMP28Q9H239 520 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 OR51M1Q9H341 326 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 HRASLSQ9HDD0 168 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 SCP2D1Q9UJQ7 156 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 PURGQ9UJV8 347 aaKnown RBP4.24□□□□□ -1.73
SRP54-211ENST00000556445 NUP50Q9UKX7 468 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 PAIP2BQ9ULR5 123 aaKnown RBP4.24□□□□□ -1.73
SRP54-211ENST00000556445 MRPS28Q9Y2Q9 187 aaKnown RBP4.24□□□□□ -1.73
SRP54-211ENST00000556445 NCKAP5O14513 1909 aa4.24□□□□□ -1.73
SRP54-211ENST00000556445 MED12Q93074 2177 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 CIB4A0PJX0 185 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 A6NIN4 97 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 SLC22A20A6NK97 555 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 TMEM14DPA8MWL7 114 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 DISC1C4P0D8 188 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 PRSS44E7EML9 344 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 H3BSH0 61 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 SIRPB1O00241 398 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 CA11O75493 328 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 CYB5AP00167 134 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 IL5P05113 134 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 MELTFP08582 738 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 HOXD4P09016 255 aaPredicted RBP4.23□□□□□ -1.73
SRP54-211ENST00000556445 GTF2F2P13984 249 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 ERP29P30040 261 aaKnown RBP4.23□□□□□ -1.73
SRP54-211ENST00000556445 APLNRP35414 380 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 CEACAM3P40198 252 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 OR3A2P47893 321 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 FUT6P51993 359 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 PSG4Q00888 419 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 RBM39Q14498 530 aaKnown RBP4.23□□□□□ -1.73
SRP54-211ENST00000556445 TGIF1Q15583 401 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 C3AR1Q16581 482 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 KRTAP27-1Q3LI81 207 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 ZFP69Q49AA0 526 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 SLC22A6Q4U2R8 563 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 ACTBL2Q562R1 376 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 TSPO2Q5TGU0 170 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 FBXW9Q5XUX1 488 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 IGFL3Q6UXB1 125 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 Q71RC1 249 aaPredicted RBP4.23□□□□□ -1.73
SRP54-211ENST00000556445 ANGPTL5Q86XS5 388 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 ZNF584Q8IVC4 421 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 BOD1L2Q8IYS8 172 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 ZNF101Q8IZC7 436 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 TCTE3Q8IZS6 198 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 OR51A2Q8NGJ7 313 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 OR5L1Q8NGL2 311 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 OR10R2Q8NGX6 335 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 OR6F1Q8NGZ6 308 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 FNDC9Q8TBE3 224 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 PLPPR1Q8TBJ4 325 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 ASB13Q8WXK3 278 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 APOBEC3DQ96AK3 386 aaPredicted RBP4.23□□□□□ -1.73
SRP54-211ENST00000556445 FBXO17Q96EF6 278 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 MRPS24Q96EL2 167 aaKnown RBP4.23□□□□□ -1.73
SRP54-211ENST00000556445 BORCS8Q96FH0 119 aa4.23□□□□□ -1.73
SRP54-211ENST00000556445 SLC25A21Q9BQT8 299 aaPredicted RBP4.23□□□□□ -1.73
SRP54-211ENST00000556445 TMEM59Q9BXS4 323 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms