RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 NHLRC3Q5JS37 347 aa10.59□□□□□ -0.71
ACTN1-219ENST00000556432 CD200R1LQ6Q8B3 271 aa10.59□□□□□ -0.71
ACTN1-219ENST00000556432 FAM131AQ6UXB0 335 aa10.59□□□□□ -0.71
ACTN1-219ENST00000556432 RPP25LQ8N5L8 163 aaKnown RBP10.59□□□□□ -0.71
ACTN1-219ENST00000556432 LFNGQ8NES3 379 aa10.59□□□□□ -0.71
ACTN1-219ENST00000556432 OR8J1Q8NGP2 316 aa10.59□□□□□ -0.71
ACTN1-219ENST00000556432 OR5AK2Q8NH90 309 aa10.59□□□□□ -0.71
ACTN1-219ENST00000556432 MRPS24Q96EL2 167 aaKnown RBP10.59□□□□□ -0.71
ACTN1-219ENST00000556432 MRPL48Q96GC5 212 aaKnown RBP10.59□□□□□ -0.71
ACTN1-219ENST00000556432 THAP7Q9BT49 309 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-219ENST00000556432 RIBC2Q9H4K1 309 aa10.59□□□□□ -0.71
ACTN1-219ENST00000556432 GAB2Q9UQC2 676 aa10.59□□□□□ -0.71
ACTN1-219ENST00000556432 MCRIP1C9JLW8 97 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 G3V2T6 193 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 TFAP2AP05549 437 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 RPSAP08865 295 aaKnown RBP10.58□□□□□ -0.72
ACTN1-219ENST00000556432 SOX2P48431 317 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 ADARB1P78563 741 aaKnown RBP10.58□□□□□ -0.72
ACTN1-219ENST00000556432 KLF5Q13887 457 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-219ENST00000556432 TATDN3Q17R31 274 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 SLC22A6Q4U2R8 563 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 MORN2Q502X0 79 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 AKIRIN2Q53H80 203 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 TRAT1Q6PIZ9 186 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 ASCL4Q6XD76 172 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 DEFB125Q8N687 156 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 OR52L2PQ8NGH6 319 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 SLC7A6OSQ96CW6 309 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-219ENST00000556432 PDCD1LG2Q9BQ51 273 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 NEURL2Q9BR09 285 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 SRD5A3Q9H8P0 318 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 PAK1IP1Q9NWT1 392 aaPredicted RBP10.58□□□□□ -0.72
ACTN1-219ENST00000556432 SLC2A8Q9NY64 477 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 TAS2R4Q9NYW5 299 aa10.58□□□□□ -0.72
ACTN1-219ENST00000556432 SAA2-SAA4A0A096LPE2 208 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 NUPR2A6NF83 97 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 TMEM212A6NML5 194 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 H7C2Y5 167 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 GSTP1P09211 210 aaKnown RBP10.57□□□□□ -0.72
ACTN1-219ENST00000556432 SAA2P0DJI9 122 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-219ENST00000556432 RCC1P18754 421 aaPredicted RBP10.57□□□□□ -0.72
ACTN1-219ENST00000556432 DDI2Q5TDH0 399 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 KDM4DQ6B0I6 523 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 IL34Q6ZMJ4 242 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 ACBD7Q8N6N7 88 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 GRPEL2Q8TAA5 225 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 CIB1Q99828 191 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 TAF9BQ9HBM6 251 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 SPACA1Q9HBV2 294 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 IMPAD1Q9NX62 359 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 IL36GQ9NZH8 169 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 KCNIP1Q9NZI2 227 aa10.57□□□□□ -0.72
ACTN1-219ENST00000556432 A0A0G2JLM5 398 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 CSN3P07498 182 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 GTF2F2P13984 249 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 POLR2IP36954 125 aaKnown RBP10.56□□□□□ -0.72
ACTN1-219ENST00000556432 PPP3R1P63098 170 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 RPEL1Q2QD12 228 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 MOGAT2Q3SYC2 334 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 LINC00322Q6ZN03 302 aaPredicted RBP10.56□□□□□ -0.72
ACTN1-219ENST00000556432 ZNF833PQ6ZTB9 187 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 ZDHHC13Q8IUH4 622 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 ODF3L1Q8IXM7 274 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 POC5Q8NA72 575 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 OR2AK2Q8NG84 335 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 TMEM106AQ96A25 262 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 WFDC10AQ9H1F0 79 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 METTL1Q9UBP6 276 aaKnown RBP10.56□□□□□ -0.72
ACTN1-219ENST00000556432 JPT1Q9UK76 154 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 ADAM30Q9UKF2 790 aa10.56□□□□□ -0.72
ACTN1-219ENST00000556432 A0A1W2PP11 408 aa10.55□□□□□ -0.72
ACTN1-219ENST00000556432 TCRBV3S1A0A5B6 114 aa10.55□□□□□ -0.72
ACTN1-219ENST00000556432 GYG2O15488 501 aa10.55□□□□□ -0.72
ACTN1-219ENST00000556432 DEDDO75618 318 aa10.55□□□□□ -0.72
ACTN1-219ENST00000556432 CA2P00918 260 aa10.55□□□□□ -0.72
ACTN1-219ENST00000556432 MAS1P04201 325 aa10.55□□□□□ -0.72
ACTN1-219ENST00000556432 CD2P06729 351 aa10.55□□□□□ -0.72
ACTN1-219ENST00000556432 CD7P09564 240 aa10.55□□□□□ -0.72
ACTN1-219ENST00000556432 ZNF93P35789 620 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-219ENST00000556432 GUCA2BQ16661 112 aa10.55□□□□□ -0.72
ACTN1-219ENST00000556432 RAB12Q6IQ22 244 aa10.55□□□□□ -0.72
ACTN1-219ENST00000556432 ZNF529Q6P280 563 aa10.55□□□□□ -0.72
ACTN1-219ENST00000556432 OR5T1Q8NG75 326 aa10.55□□□□□ -0.72
ACTN1-219ENST00000556432 MYCBPQ99417 103 aaPredicted RBP10.55□□□□□ -0.72
ACTN1-219ENST00000556432 ALG8Q9BVK2 526 aa10.55□□□□□ -0.72
ACTN1-219ENST00000556432 JAM3Q9BX67 310 aa10.55□□□□□ -0.72
ACTN1-219ENST00000556432 OR11H12B2RN74 326 aa10.54□□□□□ -0.72
ACTN1-219ENST00000556432 ZNF780AO75290 641 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-219ENST00000556432 FADS2O95864 444 aaKnown RBP10.54□□□□□ -0.72
ACTN1-219ENST00000556432 DEFA5Q01523 94 aa10.54□□□□□ -0.72
ACTN1-219ENST00000556432 DYRK1AQ13627 763 aa10.54□□□□□ -0.72
ACTN1-219ENST00000556432 GLDNQ6ZMI3 551 aaPredicted RBP10.54□□□□□ -0.72
ACTN1-219ENST00000556432 LHFPL3Q86UP9 236 aa10.54□□□□□ -0.72
ACTN1-219ENST00000556432 OR2K2Q8NGT1 345 aa10.54□□□□□ -0.72
ACTN1-219ENST00000556432 DYNLRB2Q8TF09 96 aa10.54□□□□□ -0.72
ACTN1-219ENST00000556432 GATAD1Q8WUU5 269 aa10.54□□□□□ -0.72
ACTN1-219ENST00000556432 ISG20L2Q9H9L3 353 aaKnown RBP10.54□□□□□ -0.72
ACTN1-219ENST00000556432 TMEM138Q9NPI0 162 aa10.54□□□□□ -0.72
ACTN1-219ENST00000556432 PEMTQ9UBM1 199 aa10.54□□□□□ -0.72
ACTN1-219ENST00000556432 SLC23A1Q9UHI7 598 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms