RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 DEFB112Q30KQ8 113 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 PLA1AQ53H76 456 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 CT45A1Q5HYN5 189 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 LYG1Q8N1E2 194 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 BEND2Q8NDZ0 799 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 CT45A3Q8NHU0 189 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 EHFQ9NZC4 300 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 MTFP1Q9UDX5 166 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 ANAPC10Q9UM13 185 aa11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 AMMECR1Q9Y4X0 333 aaPredicted RBP11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 RBM7Q9Y580 266 aaKnown RBP11.4□□□□□ -0.58
VIPAS39-208ENST00000556412 BUB1B-PAK6H3BSN5 160 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 FAM157CP0CG43 387 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 OR5H8P0DN80 308 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 HRH1P35367 487 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 ETV6P41212 452 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 RFX2P48378 723 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 TAS2R46P59540 309 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 CDK10Q15131 360 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 LYSMD2Q8IV50 215 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 Q8N402 240 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 ZNF439Q8NDP4 499 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 TBL2Q9Y4P3 447 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 TLN2Q9Y4G6 2542 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 YLPM1P49750 1951 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 LEUTXA8MZ59 168 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 ZNF736B4DX44 427 aaPredicted RBP11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 M0QYG6 137 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 NAT1P18440 290 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 CEACAM3P40198 252 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 Q3ZCU0 254 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 LDLRAD2Q5SZI1 272 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 RBMS3Q6XE24 437 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 SLC25A48Q6ZT89 311 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 EDARADDQ8WWZ3 215 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 RPEQ96AT9 228 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 THAP7Q9BT49 309 aaPredicted RBP11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 C11orf54Q9H0W9 315 aaPredicted RBP11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 DPM3Q9P2X0 92 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 RNF150Q9ULK6 438 aa11.39□□□□□ -0.59
VIPAS39-208ENST00000556412 SVEP1Q4LDE5 3571 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 GSTZ1O43708 216 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 DIRAS3O95661 229 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 CD3DP04234 171 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 FBP1P09467 338 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 OR8U9P0C7N5 309 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 PTBP1P26599 531 aaKnown RBP eCLIP11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 IL3RAP26951 378 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 FCGR2CP31995 323 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 REG1BP48304 166 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 MINOS1Q5TGZ0 78 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 C9orf139Q6ZV77 190 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 H1FOOQ8IZA3 346 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 OR8U1Q8NH10 309 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 TOMM40LQ969M1 308 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 CREB3L1Q96BA8 519 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 ABHD14BQ96IU4 210 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 SRRQ9GZT4 340 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 MINOS1-NBL1R4GNA1 71 aa11.38□□□□□ -0.59
VIPAS39-208ENST00000556412 LANCL1O43813 399 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 RAB7AP51149 207 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 TSPAN5P62079 268 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 ZNF45Q02386 682 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 RNASE10Q5GAN6 216 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 TPTE2P1Q5T6R2 138 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 LURAP1LQ8IV03 231 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 DYNAPQ8N1N2 210 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 SIGLECL1Q8N7X8 197 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 C8orf31Q8N9H6 132 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 MALSU1Q96EH3 234 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 ZNF48Q96MX3 618 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 IFI27L2Q9H2X8 130 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 TNFRSF19Q9NS68 423 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 IFNA6P05013 189 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 CSF1P09603 554 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 TAS2R19P59542 299 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 FXYD4P59646 89 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 DIAPH2-AS1Q14236 149 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 ACTBL2Q562R1 376 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 MFSD4AQ8N468 514 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 LINC00311Q8N616 119 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 OR2D2Q9H210 308 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 AKIP1Q9NQ31 210 aa11.37□□□□□ -0.59
VIPAS39-208ENST00000556412 HSD17B6O14756 317 aa11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 RAB3DO95716 219 aa11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 AADACP22760 399 aa11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 GPR12P47775 334 aa11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 INPP1P49441 399 aa11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 SSBP1Q04837 148 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 LY6G6FQ5SQ64 297 aa11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 TRIQKQ629K1 86 aa11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 FAAP20Q6NZ36 180 aa11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 STEAP1BQ6NZ63 245 aa11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 OVCH2Q7RTZ1 564 aa11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 TMEM229BQ8NBD8 167 aa11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 ZNF418Q8TF45 676 aaPredicted RBP11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 S100ZQ8WXG8 99 aa11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 AJUBAQ96IF1 538 aa11.36□□□□□ -0.59
VIPAS39-208ENST00000556412 ZNF2Q9BSG1 426 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms