RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 ABHD14AQ9BUJ0 271 aa16.29■□□□□ 0.2
RCCD1-205ENST00000556333 SMIM31A0A1B0GVY4 71 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 VGLL3A8MV65 326 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 H3BMQ9 156 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 LY6LH3BQJ8 138 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 FABP7O15540 132 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 XRCC3O43542 346 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 GPR137BO60478 399 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 GSTT2P0CG29 244 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 GSTT2BP0CG30 244 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 DTYMKP23919 212 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 ZNF134P52741 427 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 CT45A1Q5HYN5 189 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 LYG1Q8N1E2 194 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 ZNF439Q8NDP4 499 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 OR2AK2Q8NG84 335 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 OR4A4PQ8NGN8 299 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 CT45A3Q8NHU0 189 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 GCDHQ92947 438 aaPredicted RBP16.28■□□□□ 0.2
RCCD1-205ENST00000556333 OR1A1Q9P1Q5 309 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 CEPT1Q9Y6K0 416 aa16.28■□□□□ 0.2
RCCD1-205ENST00000556333 OOSP1A8MZH6 123 aa16.27■□□□□ 0.2
RCCD1-205ENST00000556333 HSD17B6O14756 317 aa16.27■□□□□ 0.2
RCCD1-205ENST00000556333 BET1O15155 118 aa16.27■□□□□ 0.2
RCCD1-205ENST00000556333 LPLP06858 475 aa16.27■□□□□ 0.2
RCCD1-205ENST00000556333 PTHLHP12272 177 aa16.27■□□□□ 0.2
RCCD1-205ENST00000556333 CEACAM6P40199 344 aa16.27■□□□□ 0.2
RCCD1-205ENST00000556333 REG1BP48304 166 aa16.27■□□□□ 0.2
RCCD1-205ENST00000556333 RAB7AP51149 207 aa16.27■□□□□ 0.2
RCCD1-205ENST00000556333 DIAPH2-AS1Q14236 149 aa16.27■□□□□ 0.2
RCCD1-205ENST00000556333 TAF15Q92804 592 aaKnown RBP eCLIP16.27■□□□□ 0.2
RCCD1-205ENST00000556333 CMTM3Q96MX0 182 aa16.27■□□□□ 0.2
RCCD1-205ENST00000556333 RGS5O15539 181 aa16.26■□□□□ 0.19
RCCD1-205ENST00000556333 APOA1P02647 267 aa16.26■□□□□ 0.19
RCCD1-205ENST00000556333 GAPDHP04406 335 aaKnown RBP16.26■□□□□ 0.19
RCCD1-205ENST00000556333 CD24P25063 80 aa16.26■□□□□ 0.19
RCCD1-205ENST00000556333 IGSF11Q5DX21 431 aa16.26■□□□□ 0.19
RCCD1-205ENST00000556333 DHRS7BQ6IAN0 325 aaPredicted RBP16.26■□□□□ 0.19
RCCD1-205ENST00000556333 PIFOQ8TCI5 191 aa16.26■□□□□ 0.19
RCCD1-205ENST00000556333 AUNIPQ9H7T9 357 aa16.26■□□□□ 0.19
RCCD1-205ENST00000556333 PITPNC1Q9UKF7 332 aa16.26■□□□□ 0.19
RCCD1-205ENST00000556333 TCF19Q9Y242 345 aa16.26■□□□□ 0.19
RCCD1-205ENST00000556333 MRPS7Q9Y2R9 242 aaKnown RBP16.26■□□□□ 0.19
RCCD1-205ENST00000556333 SSX5O60225 188 aa16.25■□□□□ 0.19
RCCD1-205ENST00000556333 ELK1P19419 428 aa16.25■□□□□ 0.19
RCCD1-205ENST00000556333 DYNLT3P51808 116 aa16.25■□□□□ 0.19
RCCD1-205ENST00000556333 TAS2R20P59543 309 aa16.25■□□□□ 0.19
RCCD1-205ENST00000556333 HERPUD1Q15011 391 aa16.25■□□□□ 0.19
RCCD1-205ENST00000556333 SRSF7Q16629 238 aaKnown RBP eCLIP16.25■□□□□ 0.19
RCCD1-205ENST00000556333 MOB3BQ86TA1 216 aa16.25■□□□□ 0.19
RCCD1-205ENST00000556333 TMEM219Q86XT9 240 aa16.25■□□□□ 0.19
RCCD1-205ENST00000556333 OR10J5Q8NHC4 309 aa16.25■□□□□ 0.19
RCCD1-205ENST00000556333 DYNC2LI1Q8TCX1 351 aa16.25■□□□□ 0.19
RCCD1-205ENST00000556333 CAPSLQ8WWF8 208 aa16.25■□□□□ 0.19
RCCD1-205ENST00000556333 EDARADDQ8WWZ3 215 aa16.25■□□□□ 0.19
RCCD1-205ENST00000556333 GINS4Q9BRT9 223 aa16.25■□□□□ 0.19
RCCD1-205ENST00000556333 RAB18Q9NP72 206 aa16.25■□□□□ 0.19
RCCD1-205ENST00000556333 IGKV1D-8A0A087WSZ0 117 aa16.24■□□□□ 0.19
RCCD1-205ENST00000556333 IGKV1-6A0A0C4DH72 117 aa16.24■□□□□ 0.19
RCCD1-205ENST00000556333 MEIS3P1A6NDR6 274 aa16.24■□□□□ 0.19
RCCD1-205ENST00000556333 TIMM23O14925 209 aa16.24■□□□□ 0.19
RCCD1-205ENST00000556333 ST8SIA5O15466 376 aa16.24■□□□□ 0.19
RCCD1-205ENST00000556333 HKR1P10072 659 aa16.24■□□□□ 0.19
RCCD1-205ENST00000556333 RPL15P61313 204 aaKnown RBP16.24■□□□□ 0.19
RCCD1-205ENST00000556333 ZNF816Q0VGE8 651 aaPredicted RBP16.24■□□□□ 0.19
RCCD1-205ENST00000556333 LY6G6FQ5SQ64 297 aa16.24■□□□□ 0.19
RCCD1-205ENST00000556333 TGIF2LXQ8IUE1 241 aa16.24■□□□□ 0.19
RCCD1-205ENST00000556333 OR8H3Q8N146 312 aa16.24■□□□□ 0.19
RCCD1-205ENST00000556333 DRAM1Q8N682 238 aa16.24■□□□□ 0.19
RCCD1-205ENST00000556333 OR56B4Q8NH76 319 aa16.24■□□□□ 0.19
RCCD1-205ENST00000556333 IFT46Q9NQC8 304 aa16.24■□□□□ 0.19
RCCD1-205ENST00000556333 RDH8Q9NYR8 311 aa16.24■□□□□ 0.19
RCCD1-205ENST00000556333 CCDC59Q9P031 241 aaKnown RBP16.24■□□□□ 0.19
RCCD1-205ENST00000556333 RSL24D1Q9UHA3 163 aaKnown RBP16.24■□□□□ 0.19
RCCD1-205ENST00000556333 IGHV1-3A0A0C4DH29 117 aa16.23■□□□□ 0.19
RCCD1-205ENST00000556333 A0A1W2PPI3 338 aa16.23■□□□□ 0.19
RCCD1-205ENST00000556333 FCER2P06734 321 aa16.23■□□□□ 0.19
RCCD1-205ENST00000556333 HES1Q14469 280 aa16.23■□□□□ 0.19
RCCD1-205ENST00000556333 LIAT1Q6ZQX7 453 aa16.23■□□□□ 0.19
RCCD1-205ENST00000556333 Q6ZS49 121 aa16.23■□□□□ 0.19
RCCD1-205ENST00000556333 GVQW1Q8N7I0 195 aa16.23■□□□□ 0.19
RCCD1-205ENST00000556333 RTN4IP1Q8WWV3 396 aaPredicted RBP16.23■□□□□ 0.19
RCCD1-205ENST00000556333 CABLES2Q9BTV7 478 aa16.23■□□□□ 0.19
RCCD1-205ENST00000556333 PARP12Q9H0J9 701 aaKnown RBP16.23■□□□□ 0.19
RCCD1-205ENST00000556333 C1RLQ9NZP8 487 aa16.23■□□□□ 0.19
RCCD1-205ENST00000556333 A6NDX4 124 aa16.22■□□□□ 0.19
RCCD1-205ENST00000556333 CBX5P45973 191 aa16.22■□□□□ 0.19
RCCD1-205ENST00000556333 ARPC4P59998 168 aa16.22■□□□□ 0.19
RCCD1-205ENST00000556333 CCBE1Q6UXH8 406 aaPredicted RBP16.22■□□□□ 0.19
RCCD1-205ENST00000556333 BEST4Q8NFU0 473 aa16.22■□□□□ 0.19
RCCD1-205ENST00000556333 ST6GALNAC6Q969X2 333 aa16.22■□□□□ 0.19
RCCD1-205ENST00000556333 C6orf62Q9GZU0 229 aaPredicted RBP16.22■□□□□ 0.19
RCCD1-205ENST00000556333 C11orf54Q9H0W9 315 aaPredicted RBP16.22■□□□□ 0.19
RCCD1-205ENST00000556333 PIPOXQ9P0Z9 390 aa16.22■□□□□ 0.19
RCCD1-205ENST00000556333 EXTL2Q9UBQ6 330 aa16.22■□□□□ 0.19
RCCD1-205ENST00000556333 ADAM30Q9UKF2 790 aa16.22■□□□□ 0.19
RCCD1-205ENST00000556333 RBM7Q9Y580 266 aaKnown RBP16.22■□□□□ 0.19
RCCD1-205ENST00000556333 SAA2-SAA4A0A096LPE2 208 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 TRBV6-7A0A0A0MS04 114 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 IGHV3-72A0A0B4J1Y9 119 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms