RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 RPUSD4Q96CM3 377 aaKnown RBP12.68□□□□□ -0.38
NEK9-209ENST00000556170 SEC11CQ9BY50 192 aa12.68□□□□□ -0.38
NEK9-209ENST00000556170 OPN3Q9H1Y3 402 aaPredicted RBP12.68□□□□□ -0.38
NEK9-209ENST00000556170 C7orf77A4D0Y5 90 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 SYNGR2O43760 224 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 CA11O75493 328 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 NDUFB7P17568 137 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 ADIRFQ15847 76 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 LFNGQ8NES3 379 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 OR52L2PQ8NGH6 319 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 OR4A16Q8NH70 328 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 RSG1Q9BU20 258 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 G6PCP35575 357 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 HMGN3Q15651 99 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 PDLIM3Q53GG5 364 aaPredicted RBP12.67□□□□□ -0.38
NEK9-209ENST00000556170 ZNF705AQ6ZN79 300 aaPredicted RBP12.67□□□□□ -0.38
NEK9-209ENST00000556170 SLC35B3Q9H1N7 401 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 CYTL1Q9NRR1 136 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 WSB1Q9Y6I7 421 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 GTF3C1Q12789 2109 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 IGHV3OR15-7A0A075B7D8 119 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 A0A1W2PPE2 198 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 DBX1A6NMT0 343 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 RRP8O43159 456 aaKnown RBP12.67□□□□□ -0.38
NEK9-209ENST00000556170 SMIM21Q3B7S5 101 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 OR1L1Q8NH94 360 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 NTNG2Q96CW9 530 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 GMPPAQ96IJ6 420 aaPredicted RBP12.67□□□□□ -0.38
NEK9-209ENST00000556170 ABHD14BQ96IU4 210 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 PARP11Q9NR21 331 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 CRIM1Q9NZV1 1036 aa12.67□□□□□ -0.38
NEK9-209ENST00000556170 A0A1W2PPH5 198 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 HIST1H3AP68431 136 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 HIST2H3PS2Q5TEC6 136 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 VWA1Q6PCB0 445 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 WFDC8Q8IUA0 241 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 Q8IYB0 196 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 NECAP1Q8NC96 275 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 OR5P3Q8WZ94 311 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 TP53TG5Q9Y2B4 290 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 H0YL77 283 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 AP4M1O00189 453 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 FCGR3BO75015 233 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 SEC11BP0C7V7 166 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 SELENOHQ8IZQ5 122 aaKnown RBP12.66□□□□□ -0.38
NEK9-209ENST00000556170 OR4A4PQ8NGN8 299 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 TMEM45BQ96B21 275 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 RARRES2Q99969 163 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 M0R1X1 148 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 HOXA4Q00056 320 aaPredicted RBP12.66□□□□□ -0.38
NEK9-209ENST00000556170 ABHD14AQ9BUJ0 271 aa12.66□□□□□ -0.38
NEK9-209ENST00000556170 A0A1W2PPE3 182 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 ZNF503-AS2A6NEH8 195 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 YIF1AO95070 293 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 OR10P1Q8NGE3 313 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 KLF14Q8TD94 323 aaPredicted RBP12.65□□□□□ -0.38
NEK9-209ENST00000556170 GPR146Q96CH1 333 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 LINC00470Q9BZP3 86 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 ZNF71Q9NQZ8 489 aaPredicted RBP12.65□□□□□ -0.38
NEK9-209ENST00000556170 FRYLO94915 3013 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 OPN1MWP04001 364 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 FBP1P09467 338 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 OPN1MW2P0DN77 364 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 OPN1MW3P0DN78 364 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 FABP4P15090 132 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 GALNT14Q96FL9 552 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 GAPDHP04406 335 aaKnown RBP12.65□□□□□ -0.38
NEK9-209ENST00000556170 WNT5AP41221 380 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 ZNF610Q8N9Z0 462 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 FAM117AQ9C073 453 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 CACNA1BQ00975 2339 aa12.65□□□□□ -0.38
NEK9-209ENST00000556170 IGSF23A1L1A6 192 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 MT-ND4LP03901 98 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 RNFT1Q5M7Z0 435 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 MRPL41Q8IXM3 137 aaKnown RBP12.64□□□□□ -0.39
NEK9-209ENST00000556170 RNF138Q8WVD3 245 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 H1FXQ92522 213 aaKnown RBP12.64□□□□□ -0.39
NEK9-209ENST00000556170 RNF122Q9H9V4 155 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 CACFD1Q9UGQ2 172 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 WDFY4Q6ZS81 3184 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 USF3Q68DE3 2245 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 RBFOX3A6NFN3 312 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 ZNF727A8MUV8 499 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 CDX4O14627 284 aaPredicted RBP12.64□□□□□ -0.39
NEK9-209ENST00000556170 OR5B12Q96R08 314 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 RAB40CQ96S21 281 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 SPRR3Q9UBC9 169 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 ZNF25P17030 456 aaPredicted RBP12.64□□□□□ -0.39
NEK9-209ENST00000556170 ZNF429Q86V71 674 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 SLC25A22Q9H936 323 aa12.64□□□□□ -0.39
NEK9-209ENST00000556170 ZNF883P0CG24 379 aa12.63□□□□□ -0.39
NEK9-209ENST00000556170 SLC38A11Q08AI6 406 aa12.63□□□□□ -0.39
NEK9-209ENST00000556170 PSG7Q13046 419 aa12.63□□□□□ -0.39
NEK9-209ENST00000556170 MSI2Q96DH6 328 aaKnown RBP12.63□□□□□ -0.39
NEK9-209ENST00000556170 CLN8Q9UBY8 286 aa12.63□□□□□ -0.39
NEK9-209ENST00000556170 TNFSF4P23510 183 aa12.63□□□□□ -0.39
NEK9-209ENST00000556170 TNFSF10P50591 281 aa12.63□□□□□ -0.39
NEK9-209ENST00000556170 UBE2G2P60604 165 aa12.63□□□□□ -0.39
NEK9-209ENST00000556170 WDYHV1Q96HA8 205 aa12.63□□□□□ -0.39
NEK9-209ENST00000556170 GCM1Q9NP62 436 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms