RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ST8SIA5O15466 376 aa8.82□□□□□ -1
TDP1-211ENST00000555178 ZNF728P0DKX0 622 aa8.82□□□□□ -1
TDP1-211ENST00000555178 PPIAL4GP0DN37 164 aa8.82□□□□□ -1
TDP1-211ENST00000555178 PGAM2P15259 253 aa8.82□□□□□ -1
TDP1-211ENST00000555178 ZBTB25P24278 435 aa8.82□□□□□ -1
TDP1-211ENST00000555178 ZNF134P52741 427 aa8.82□□□□□ -1
TDP1-211ENST00000555178 HERV-K104P61576 105 aa8.82□□□□□ -1
TDP1-211ENST00000555178 TRAT1Q6PIZ9 186 aa8.82□□□□□ -1
TDP1-211ENST00000555178 TMEM230Q96A57 120 aa8.82□□□□□ -1
TDP1-211ENST00000555178 MSI2Q96DH6 328 aaKnown RBP8.82□□□□□ -1
TDP1-211ENST00000555178 C5orf30Q96GV9 206 aa8.82□□□□□ -1
TDP1-211ENST00000555178 RTBDNQ9BSG5 229 aaPredicted RBP8.82□□□□□ -1
TDP1-211ENST00000555178 COPZ2Q9P299 210 aa8.82□□□□□ -1
TDP1-211ENST00000555178 RNF150Q9ULK6 438 aa8.82□□□□□ -1
TDP1-211ENST00000555178 TRBV23-1A0A0A0MS06 115 aa8.81□□□□□ -1
TDP1-211ENST00000555178 HSD17B6O14756 317 aa8.81□□□□□ -1
TDP1-211ENST00000555178 CTXN2P0C2S0 81 aa8.81□□□□□ -1
TDP1-211ENST00000555178 OR8U9P0C7N5 309 aa8.81□□□□□ -1
TDP1-211ENST00000555178 IGHV4-31P0DP07 118 aa8.81□□□□□ -1
TDP1-211ENST00000555178 FPR2P25090 351 aa8.81□□□□□ -1
TDP1-211ENST00000555178 GNG10P50151 68 aa8.81□□□□□ -1
TDP1-211ENST00000555178 UBE2MP61081 183 aaKnown RBP8.81□□□□□ -1
TDP1-211ENST00000555178 PHLDA2Q53GA4 152 aa8.81□□□□□ -1
TDP1-211ENST00000555178 ZNF818PQ6ZRF7 136 aa8.81□□□□□ -1
TDP1-211ENST00000555178 OR8U1Q8NH10 309 aa8.81□□□□□ -1
TDP1-211ENST00000555178 SMR3AQ99954 134 aa8.81□□□□□ -1
TDP1-211ENST00000555178 SLC25A21Q9BQT8 299 aaPredicted RBP8.81□□□□□ -1
TDP1-211ENST00000555178 CCL28Q9NRJ3 127 aa8.81□□□□□ -1
TDP1-211ENST00000555178 IDI2-AS1Q9NZ38 188 aa8.81□□□□□ -1
TDP1-211ENST00000555178 PRR13Q9NZ81 148 aa8.81□□□□□ -1
TDP1-211ENST00000555178 ONECUT1Q9UBC0 465 aa8.81□□□□□ -1
TDP1-211ENST00000555178 GPR132Q9UNW8 380 aa8.81□□□□□ -1
TDP1-211ENST00000555178 OR2W1Q9Y3N9 320 aa8.81□□□□□ -1
TDP1-211ENST00000555178 ALG5Q9Y673 324 aa8.81□□□□□ -1
TDP1-211ENST00000555178 CUBNO60494 3623 aa8.81□□□□□ -1
TDP1-211ENST00000555178 A8MXK9 166 aa8.81□□□□□ -1
TDP1-211ENST00000555178 TNFSF12O43508 249 aa8.81□□□□□ -1
TDP1-211ENST00000555178 PEX14O75381 377 aa8.81□□□□□ -1
TDP1-211ENST00000555178 AVPP01185 164 aa8.81□□□□□ -1
TDP1-211ENST00000555178 IGLV2-14P01704 120 aa8.81□□□□□ -1
TDP1-211ENST00000555178 AKR1C4P17516 323 aa8.81□□□□□ -1
TDP1-211ENST00000555178 HTD2P86397 168 aa8.81□□□□□ -1
TDP1-211ENST00000555178 LOXL1Q08397 574 aaPredicted RBP8.81□□□□□ -1
TDP1-211ENST00000555178 KLRD1Q13241 179 aa8.81□□□□□ -1
TDP1-211ENST00000555178 MORN2Q502X0 79 aa8.81□□□□□ -1
TDP1-211ENST00000555178 ZNF554Q86TJ5 538 aa8.81□□□□□ -1
TDP1-211ENST00000555178 PDZD9Q8IXQ8 264 aa8.81□□□□□ -1
TDP1-211ENST00000555178 C8orf46Q8TAG6 207 aa8.81□□□□□ -1
TDP1-211ENST00000555178 ABHD14BQ96IU4 210 aa8.81□□□□□ -1
TDP1-211ENST00000555178 GAL3ST2Q9H3Q3 398 aa8.81□□□□□ -1
TDP1-211ENST00000555178 LINC00574Q9H8X3 128 aa8.81□□□□□ -1
TDP1-211ENST00000555178 GFOD1Q9NXC2 390 aa8.81□□□□□ -1
TDP1-211ENST00000555178 TAS2R3Q9NYW6 316 aa8.81□□□□□ -1
TDP1-211ENST00000555178 OPN4Q9UHM6 478 aa8.81□□□□□ -1
TDP1-211ENST00000555178 A0A0A6YYJ9 748 aa8.8□□□□□ -1
TDP1-211ENST00000555178 DIRAS3O95661 229 aa8.8□□□□□ -1
TDP1-211ENST00000555178 GNRHRP30968 328 aa8.8□□□□□ -1
TDP1-211ENST00000555178 KRTAP1-1Q07627 177 aa8.8□□□□□ -1
TDP1-211ENST00000555178 TMEM249Q2WGJ8 235 aa8.8□□□□□ -1
TDP1-211ENST00000555178 HEPN1Q6WQI6 88 aa8.8□□□□□ -1
TDP1-211ENST00000555178 PNKDQ8N490 385 aa8.8□□□□□ -1
TDP1-211ENST00000555178 ZDHHC22Q8N966 263 aa8.8□□□□□ -1
TDP1-211ENST00000555178 SUCNR1Q9BXA5 334 aa8.8□□□□□ -1
TDP1-211ENST00000555178 SLC5A7Q9GZV3 580 aa8.8□□□□□ -1
TDP1-211ENST00000555178 OR2D2Q9H210 308 aa8.8□□□□□ -1
TDP1-211ENST00000555178 SIRT7Q9NRC8 400 aa8.8□□□□□ -1
TDP1-211ENST00000555178 JPT1Q9UK76 154 aa8.8□□□□□ -1
TDP1-211ENST00000555178 KCNS2Q9ULS6 477 aa8.8□□□□□ -1
TDP1-211ENST00000555178 PSG11Q9UQ72 335 aa8.8□□□□□ -1
TDP1-211ENST00000555178 IGHV2-70DA0A0C4DH43 119 aa8.8□□□□□ -1
TDP1-211ENST00000555178 PAX6P26367 422 aa8.8□□□□□ -1
TDP1-211ENST00000555178 LINC00205P59089 165 aa8.8□□□□□ -1
TDP1-211ENST00000555178 CBX3Q13185 183 aa8.8□□□□□ -1
TDP1-211ENST00000555178 PPP1R1AQ13522 171 aa8.8□□□□□ -1
TDP1-211ENST00000555178 C1orf229Q6ZS94 237 aaPredicted RBP8.8□□□□□ -1
TDP1-211ENST00000555178 CADM3Q8N126 398 aa8.8□□□□□ -1
TDP1-211ENST00000555178 RAB39BQ96DA2 213 aa8.8□□□□□ -1
TDP1-211ENST00000555178 LPAR3Q9UBY5 353 aa8.8□□□□□ -1
TDP1-211ENST00000555178 RBM7Q9Y580 266 aaKnown RBP8.8□□□□□ -1
TDP1-211ENST00000555178 SOX21Q9Y651 276 aaPredicted RBP8.8□□□□□ -1
TDP1-211ENST00000555178 MAST4O15021 2626 aa8.8□□□□□ -1
TDP1-211ENST00000555178 GPR37O15354 613 aa8.79□□□□□ -1
TDP1-211ENST00000555178 OR4E1P0C645 316 aa8.79□□□□□ -1
TDP1-211ENST00000555178 IGHV1-8P0DP01 117 aa8.79□□□□□ -1
TDP1-211ENST00000555178 PIGPP57054 158 aa8.79□□□□□ -1
TDP1-211ENST00000555178 SUPT4H1P63272 117 aaKnown RBP8.79□□□□□ -1
TDP1-211ENST00000555178 CT45A1Q5HYN5 189 aa8.79□□□□□ -1
TDP1-211ENST00000555178 LDLRAD2Q5SZI1 272 aa8.79□□□□□ -1
TDP1-211ENST00000555178 HCP5Q6MZN7 132 aa8.79□□□□□ -1
TDP1-211ENST00000555178 BTNL3Q6UXE8 466 aa8.79□□□□□ -1
TDP1-211ENST00000555178 ZNF439Q8NDP4 499 aa8.79□□□□□ -1
TDP1-211ENST00000555178 CT45A3Q8NHU0 189 aa8.79□□□□□ -1
TDP1-211ENST00000555178 C1orf159Q96HA4 380 aa8.79□□□□□ -1
TDP1-211ENST00000555178 AGMATQ9BSE5 352 aa8.79□□□□□ -1
TDP1-211ENST00000555178 SLC2A9Q9NRM0 540 aa8.79□□□□□ -1
TDP1-211ENST00000555178 ANK3Q12955 4377 aaKnown RBP8.79□□□□□ -1
TDP1-211ENST00000555178 A0A1W2PRD5 423 aa8.78□□□□□ -1
TDP1-211ENST00000555178 A0A1W2PRF3 423 aa8.78□□□□□ -1
TDP1-211ENST00000555178 A0A1W2PRM7 423 aa8.78□□□□□ -1
TDP1-211ENST00000555178 C17orf98A8MV24 154 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms