RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 DUSP13Q9UII6 198 aa14.59□□□□□ -0.07
SHOX-204ENST00000554971 TRIM77I1YAP6 450 aa14.58□□□□□ -0.07
SHOX-204ENST00000554971 GPR31O00270 319 aa14.58□□□□□ -0.07
SHOX-204ENST00000554971 PHF1O43189 567 aaPredicted RBP14.58□□□□□ -0.07
SHOX-204ENST00000554971 TUSC2O75896 110 aa14.58□□□□□ -0.07
SHOX-204ENST00000554971 SNAPINO95295 136 aa14.58□□□□□ -0.07
SHOX-204ENST00000554971 GNMTQ14749 295 aa14.58□□□□□ -0.07
SHOX-204ENST00000554971 SMUG1Q53HV7 270 aa14.58□□□□□ -0.07
SHOX-204ENST00000554971 BTNL8Q6UX41 500 aa14.58□□□□□ -0.07
SHOX-204ENST00000554971 FBXW12Q6X9E4 464 aa14.58□□□□□ -0.07
SHOX-204ENST00000554971 ZNF565Q8N9K5 539 aa14.58□□□□□ -0.07
SHOX-204ENST00000554971 CLRN3Q8NCR9 226 aa14.58□□□□□ -0.07
SHOX-204ENST00000554971 IL22RA2Q969J5 263 aa14.58□□□□□ -0.07
SHOX-204ENST00000554971 SLAMF9Q96A28 289 aa14.58□□□□□ -0.07
SHOX-204ENST00000554971 UQCC1Q9NVA1 299 aa14.58□□□□□ -0.07
SHOX-204ENST00000554971 MTCH1Q9NZJ7 389 aa14.58□□□□□ -0.07
SHOX-204ENST00000554971 PURGQ9UJV8 347 aaKnown RBP14.58□□□□□ -0.07
SHOX-204ENST00000554971 Q6ZPA2 131 aa14.58□□□□□ -0.08
SHOX-204ENST00000554971 C1orf174Q8IYL3 243 aa14.58□□□□□ -0.08
SHOX-204ENST00000554971 OR4D5Q8NGN0 318 aa14.58□□□□□ -0.08
SHOX-204ENST00000554971 OR4A4PQ8NGN8 299 aa14.58□□□□□ -0.08
SHOX-204ENST00000554971 CBLN4Q9NTU7 201 aa14.58□□□□□ -0.08
SHOX-204ENST00000554971 ACANP16112 2415 aa14.58□□□□□ -0.08
SHOX-204ENST00000554971 B9A039 149 aa14.57□□□□□ -0.08
SHOX-204ENST00000554971 F8W036 122 aa14.57□□□□□ -0.08
SHOX-204ENST00000554971 OVOL3O00110 214 aa14.57□□□□□ -0.08
SHOX-204ENST00000554971 TOR1AO14656 332 aa14.57□□□□□ -0.08
SHOX-204ENST00000554971 MED6O75586 246 aa14.57□□□□□ -0.08
SHOX-204ENST00000554971 IGHV3-13P01766 116 aa14.57□□□□□ -0.08
SHOX-204ENST00000554971 H2AFB1P0C5Y9 115 aa14.57□□□□□ -0.08
SHOX-204ENST00000554971 MMP9P14780 707 aa14.57□□□□□ -0.08
SHOX-204ENST00000554971 GNRHRP30968 328 aa14.57□□□□□ -0.08
SHOX-204ENST00000554971 KLF3P57682 345 aaPredicted RBP14.57□□□□□ -0.08
SHOX-204ENST00000554971 ZNF718Q3SXZ3 478 aa14.57□□□□□ -0.08
SHOX-204ENST00000554971 ZCCHC24Q8N2G6 241 aaKnown RBP14.57□□□□□ -0.08
SHOX-204ENST00000554971 CCL19Q99731 98 aa14.57□□□□□ -0.08
SHOX-204ENST00000554971 GINS3Q9BRX5 216 aa14.57□□□□□ -0.08
SHOX-204ENST00000554971 FGF23Q9GZV9 251 aaPredicted RBP14.57□□□□□ -0.08
SHOX-204ENST00000554971 LILRA1O75019 489 aa14.56□□□□□ -0.08
SHOX-204ENST00000554971 SCGB1D2O95969 90 aa14.56□□□□□ -0.08
SHOX-204ENST00000554971 WNT2P09544 360 aa14.56□□□□□ -0.08
SHOX-204ENST00000554971 PVALBP20472 110 aaPredicted RBP14.56□□□□□ -0.08
SHOX-204ENST00000554971 S100GP29377 79 aa14.56□□□□□ -0.08
SHOX-204ENST00000554971 HRH4Q9H3N8 390 aa14.56□□□□□ -0.08
SHOX-204ENST00000554971 TREM1Q9NP99 234 aa14.56□□□□□ -0.08
SHOX-204ENST00000554971 TREM2Q9NZC2 230 aa14.56□□□□□ -0.08
SHOX-204ENST00000554971 CD5P06127 495 aa14.56□□□□□ -0.08
SHOX-204ENST00000554971 CDKN1AP38936 164 aa14.56□□□□□ -0.08
SHOX-204ENST00000554971 HMGN3Q15651 99 aa14.56□□□□□ -0.08
SHOX-204ENST00000554971 IGSF11Q5DX21 431 aa14.56□□□□□ -0.08
SHOX-204ENST00000554971 Q8IYB0 196 aa14.56□□□□□ -0.08
SHOX-204ENST00000554971 CMTM1Q8IZ96 169 aa14.56□□□□□ -0.08
SHOX-204ENST00000554971 UBE2J1Q9Y385 318 aaPredicted RBP14.56□□□□□ -0.08
SHOX-204ENST00000554971 STRAPQ9Y3F4 350 aaKnown RBP14.56□□□□□ -0.08
SHOX-204ENST00000554971 LRP5LA4QPB2 252 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 FBXO24O75426 580 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 RAC2P15153 192 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 TUBG1P23258 451 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 LPAR6P43657 344 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 DVL1P1P54792 670 aaPredicted RBP14.55□□□□□ -0.08
SHOX-204ENST00000554971 PDCD1Q15116 288 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 OR2T2Q6IF00 324 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 ZNF880Q6PDB4 577 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 ZNF695Q8IW36 515 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 PUSL1Q8N0Z8 303 aaKnown RBP14.55□□□□□ -0.08
SHOX-204ENST00000554971 SLC35G3Q8N808 338 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 TP53RKQ96S44 253 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 NRIP2Q9BQI9 281 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 AIFM2Q9BRQ8 373 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 TUBG2Q9NRH3 451 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 HIVEP1P15822 2718 aa14.55□□□□□ -0.08
SHOX-204ENST00000554971 RNASEK-C17orf49H0YIS7 233 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 CTRB1P17538 263 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 KITLGP21583 273 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 UCP1P25874 307 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 GCH1P30793 250 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 MDH2P40926 338 aaKnown RBP14.54□□□□□ -0.08
SHOX-204ENST00000554971 CTRB2Q6GPI1 263 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 DHRS7BQ6IAN0 325 aaPredicted RBP14.54□□□□□ -0.08
SHOX-204ENST00000554971 BOLLQ8N9W6 283 aaKnown RBP14.54□□□□□ -0.08
SHOX-204ENST00000554971 OR11L1Q8NGX0 322 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 TAAR3PQ9P1P4 343 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 MED13LQ71F56 2210 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 NPIPB11E5RHQ5 1161 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 J3QT63 122 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 NDUFS7O75251 213 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 SPP1P10451 314 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 ADCYAP1P18509 176 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 Q6ZR03 302 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 MOB1BQ7L9L4 216 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 TBC1D26Q86UD7 250 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 FAM58AQ8N1B3 248 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 DMBX1Q8NFW5 382 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 SLC25A31Q9H0C2 315 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 OR51I2Q9H344 312 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 TLN2Q9Y4G6 2542 aa14.54□□□□□ -0.08
SHOX-204ENST00000554971 PRKACAP17612 351 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 RCC1P18754 421 aaPredicted RBP14.53□□□□□ -0.08
SHOX-204ENST00000554971 VDAC1P21796 283 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 SHEQ5VZ18 495 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms