RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PSMG3Q9BT73 122 aaPredicted RBP13.41□□□□□ -0.26
SYNE3-203ENST00000554873 MRPS16Q9Y3D3 137 aaKnown RBP13.41□□□□□ -0.26
SYNE3-203ENST00000554873 ZNF814B7Z6K7 855 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 DIRC3C9JPN6 131 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 HS3ST1O14792 307 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 CCL1P22362 96 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 DTYMKP23919 212 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 HINT1P49773 126 aaPredicted RBP13.4□□□□□ -0.26
SYNE3-203ENST00000554873 KISS1Q15726 138 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 SLC25A47Q6Q0C1 308 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 Q8N976 141 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 SAMD10Q9BYL1 202 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 ZNF160Q9HCG1 818 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 CCDC163A0A0D9SF12 145 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 A0A1W2PNR3 127 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 RNF212BA8MTL3 300 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 CHST1O43916 411 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 RRADP55042 308 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 YPEL3P61236 119 aaPredicted RBP13.4□□□□□ -0.26
SYNE3-203ENST00000554873 DOK3Q7L591 496 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 ZNF695Q8IW36 515 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 NFAM1Q8NET5 270 aaPredicted RBP13.4□□□□□ -0.26
SYNE3-203ENST00000554873 LIN37Q96GY3 246 aaPredicted RBP13.4□□□□□ -0.26
SYNE3-203ENST00000554873 TMEM222Q9H0R3 208 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 PLA2G3Q9NZ20 509 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 ADAMTS9Q9P2N4 1935 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 EXPH5Q8NEV8 1989 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 CABIN1Q9Y6J0 2220 aa13.4□□□□□ -0.26
SYNE3-203ENST00000554873 FAM166BA8MTA8 275 aa13.4□□□□□ -0.27
SYNE3-203ENST00000554873 ADAM20O43506 726 aa13.4□□□□□ -0.27
SYNE3-203ENST00000554873 TNFSF12O43508 249 aa13.4□□□□□ -0.27
SYNE3-203ENST00000554873 TRAF3IP2O43734 574 aaPredicted RBP13.4□□□□□ -0.27
SYNE3-203ENST00000554873 MYF5P13349 255 aa13.4□□□□□ -0.27
SYNE3-203ENST00000554873 CD27P26842 260 aa13.4□□□□□ -0.27
SYNE3-203ENST00000554873 PSMB3P49720 205 aa13.4□□□□□ -0.27
SYNE3-203ENST00000554873 SERF2P84101 59 aa13.4□□□□□ -0.27
SYNE3-203ENST00000554873 SLC35D1Q9NTN3 355 aa13.4□□□□□ -0.27
SYNE3-203ENST00000554873 CD99P14209 185 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 OPRM1P35372 400 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 RHOGP84095 191 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 FOXL1Q12952 345 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 VAMP3Q15836 100 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 LHFPL4Q7Z7J7 247 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 KLHDC1Q8N7A1 406 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 LHX4Q969G2 390 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 TMEM56Q96MV1 263 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 SIGLEC12Q96PQ1 595 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 ZDHHC11Q9H8X9 412 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 FGF21Q9NSA1 209 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 ZNF586Q9NXT0 402 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 KLRF1Q9NZS2 232 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 FBXL7Q9UJT9 491 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 TMEM56-RWDD3S4R434 201 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 MPPED1O15442 326 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 LTBRP36941 435 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 KRTDAPP60985 99 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 EIF3IQ13347 325 aaKnown RBP13.39□□□□□ -0.27
SYNE3-203ENST00000554873 PLPPR5Q32ZL2 321 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 PLXDC1Q8IUK5 500 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 DYRK2Q92630 601 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 TNFRSF14Q92956 283 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 ZNF501Q96CX3 271 aaPredicted RBP13.39□□□□□ -0.27
SYNE3-203ENST00000554873 ABCA7Q8IZY2 2146 aa13.39□□□□□ -0.27
SYNE3-203ENST00000554873 SPAG17Q6Q759 2223 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 CRISP2P16562 243 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 BMI1P35226 326 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 PAX9P55771 341 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 FFAR4Q5NUL3 377 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 ANKRD37Q7Z713 158 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 PINX1Q96BK5 328 aaKnown RBP13.38□□□□□ -0.27
SYNE3-203ENST00000554873 LYZL4Q96KX0 146 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 CDC42EP3Q9UKI2 254 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 UBE2J1Q9Y385 318 aaPredicted RBP13.38□□□□□ -0.27
SYNE3-203ENST00000554873 CNTRLQ7Z7A1 2325 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 TRAV34A0A0B4J273 112 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 GALR2O43603 387 aaPredicted RBP13.38□□□□□ -0.27
SYNE3-203ENST00000554873 NBEAP1P0C6P0 100 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 TSPOP30536 169 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 LHX2P50458 406 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 SIGLECL1Q8N7X8 197 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 PSMF1Q92530 271 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 ELOVL5Q9NYP7 299 aa13.38□□□□□ -0.27
SYNE3-203ENST00000554873 SLC33A1O00400 549 aaPredicted RBP13.37□□□□□ -0.27
SYNE3-203ENST00000554873 WNT2P09544 360 aa13.37□□□□□ -0.27
SYNE3-203ENST00000554873 SLC25A53Q5H9E4 307 aa13.37□□□□□ -0.27
SYNE3-203ENST00000554873 DTX1Q86Y01 620 aa13.37□□□□□ -0.27
SYNE3-203ENST00000554873 SELENOHQ8IZQ5 122 aaKnown RBP13.37□□□□□ -0.27
SYNE3-203ENST00000554873 TSTD1Q8NFU3 115 aa13.37□□□□□ -0.27
SYNE3-203ENST00000554873 SLC39A9Q9NUM3 307 aa13.37□□□□□ -0.27
SYNE3-203ENST00000554873 IGHV1-69-2A0A0G2JMI3 117 aa13.37□□□□□ -0.27
SYNE3-203ENST00000554873 K7ERU9 68 aa13.37□□□□□ -0.27
SYNE3-203ENST00000554873 HERV-K104P61576 105 aa13.37□□□□□ -0.27
SYNE3-203ENST00000554873 TESK1Q15569 626 aa13.37□□□□□ -0.27
SYNE3-203ENST00000554873 FAM180AQ6UWF9 173 aa13.37□□□□□ -0.27
SYNE3-203ENST00000554873 TCF23Q7RTU1 214 aa13.37□□□□□ -0.27
SYNE3-203ENST00000554873 SAXO1Q8IYX7 474 aa13.37□□□□□ -0.27
SYNE3-203ENST00000554873 OR4F5Q8NH21 305 aa13.37□□□□□ -0.27
SYNE3-203ENST00000554873 OR4F4Q96R69 305 aa13.37□□□□□ -0.27
SYNE3-203ENST00000554873 RBM24Q9BX46 236 aaKnown RBP13.37□□□□□ -0.27
SYNE3-203ENST00000554873 CLN8Q9UBY8 286 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms