RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 OR10Z1Q8NGY1 313 aa4.8□□□□□ -1.64
ATXN3-230ENST00000554673 CA5BP1Q8WTZ4 195 aa4.8□□□□□ -1.64
ATXN3-230ENST00000554673 SDSLQ96GA7 329 aa4.8□□□□□ -1.64
ATXN3-230ENST00000554673 CITED2Q99967 270 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-230ENST00000554673 CMSS1Q9BQ75 279 aaKnown RBP4.8□□□□□ -1.64
ATXN3-230ENST00000554673 TMEM246Q9BRR3 403 aa4.8□□□□□ -1.64
ATXN3-230ENST00000554673 SEBOXQ9HB31 216 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-230ENST00000554673 RANGRFQ9HD47 186 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-230ENST00000554673 MYOZ1Q9NP98 299 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-230ENST00000554673 TUBG2Q9NRH3 451 aa4.8□□□□□ -1.64
ATXN3-230ENST00000554673 PLSCR3Q9NRY6 295 aa4.8□□□□□ -1.64
ATXN3-230ENST00000554673 C19orf12Q9NSK7 152 aa4.8□□□□□ -1.64
ATXN3-230ENST00000554673 OR14J1Q9UGF5 321 aa4.8□□□□□ -1.64
ATXN3-230ENST00000554673 ZNF107Q9UII5 783 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-230ENST00000554673 ANXA10Q9UJ72 324 aa4.8□□□□□ -1.64
ATXN3-230ENST00000554673 PLEKHA6Q9Y2H5 1048 aa4.8□□□□□ -1.64
ATXN3-230ENST00000554673 VPS13CQ709C8 3753 aa4.8□□□□□ -1.64
ATXN3-230ENST00000554673 HELZ2Q9BYK8 2649 aaKnown RBP4.8□□□□□ -1.64
ATXN3-230ENST00000554673 WNK2Q9Y3S1 2297 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 TRBV6-7A0A0A0MS04 114 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 A0A0U1RQK1 487 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 FAM240BA0A1B0GVZ2 78 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 hCG_1809904A0A1W2PP81 198 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 A0A1W2PPE2 198 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 A0A1W2PR64 198 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 A1L4Q6 167 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 ZNF320A2RRD8 509 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 METTL21EPA6NDL7 271 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 SERPINE3A8MV23 424 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 K7N7A8 449 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 CCSO14618 274 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 NXPH2O95156 264 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 CYB5AP00167 134 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 PLA2G1BP04054 148 aaKnown RBP4.79□□□□□ -1.64
ATXN3-230ENST00000554673 IL5P05113 134 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 HEXAP06865 529 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 IL2RGP31785 369 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 APOBEC3AP31941 199 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-230ENST00000554673 TAS2R19P59542 299 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 GNG2P59768 71 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 RPL30P62888 115 aaKnown RBP4.79□□□□□ -1.64
ATXN3-230ENST00000554673 HLA-DRB3P79483 266 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 PAX2Q02962 417 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 ARFRP1Q13795 201 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 CDK10Q15131 360 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 RNF151Q2KHN1 245 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 AVPI1Q5T686 147 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 ZNF626Q68DY1 528 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 ACSM6Q6P461 480 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 DHRS11Q6UWP2 260 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 GLDNQ6ZMI3 551 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-230ENST00000554673 MEX3BQ6ZN04 569 aaKnown RBP4.79□□□□□ -1.64
ATXN3-230ENST00000554673 IDO2Q6ZQW0 420 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 MINDY2Q8NBR6 621 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 ZNF439Q8NDP4 499 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 MRGPRDQ8TDS7 321 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 NEU1Q99519 415 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 SPATA25Q9BR10 227 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 ZNF251Q9BRH9 671 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 AGMATQ9BSE5 352 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 URM1Q9BTM9 101 aaKnown RBP4.79□□□□□ -1.64
ATXN3-230ENST00000554673 TOLLIPQ9H0E2 274 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 DPAGT1Q9H3H5 408 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 C11orf1Q9H5F2 150 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 PLEKHJ1Q9NW61 149 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 MCUBQ9NWR8 336 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 RNF7Q9UBF6 113 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 IL19Q9UHD0 177 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 NUBP2Q9Y5Y2 271 aa4.79□□□□□ -1.64
ATXN3-230ENST00000554673 ZANQ9Y493 2812 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 ZNF469Q96JG9 3925 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-230ENST00000554673 IGHV3-43A0A0B4J1X8 118 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 FAM172BPA6NC97 362 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 NPIPB11E5RHQ5 1161 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 H0YIZ8 118 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 M0R233 179 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 LGALS8O00214 317 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 DEGS1O15121 323 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 SIGLEC5O15389 551 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 FABP7O15540 132 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 IGHV3-7P01780 117 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 IGHV4-39P01824 125 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 IGHV3-43DP0DP04 118 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 ZNF44P15621 663 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 CCL3L1P16619 93 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 OMGP23515 440 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 GNRHRP30968 328 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 PPOXP50336 477 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 RRAS2P62070 204 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-230ENST00000554673 DHRS2Q13268 280 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 DIAPH2-AS1Q14236 149 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 IZUMO4Q1ZYL8 232 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 ZNF585BQ52M93 769 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 PAN3Q58A45 887 aaKnown RBP4.78□□□□□ -1.64
ATXN3-230ENST00000554673 SPIN3Q5JUX0 258 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 SLC35E4Q6ICL7 350 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 SLC25A42Q86VD7 318 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 MUC15Q8N387 334 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 RFESDQ8TAC1 157 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 GLMPQ8WWB7 406 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms