RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 STAG3L3P0CL85 134 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 OPN1MW2P0DN77 364 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 OPN1MW3P0DN78 364 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 PTNP21246 168 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 PSMB3P49720 205 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 TDGF1P3P51864 188 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 CRIP2P52943 208 aaPredicted RBP2.85□□□□□ -1.95
SEC23A-207ENST00000554615 PRSS12P56730 875 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 GAGE1Q13065 139 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 RTP5Q14D33 572 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 IAH1Q2TAA2 248 aaPredicted RBP2.85□□□□□ -1.95
SEC23A-207ENST00000554615 C19orf54Q5BKX5 351 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 TSPO2Q5TGU0 170 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 C6orf15Q6UXA7 325 aaPredicted RBP2.85□□□□□ -1.95
SEC23A-207ENST00000554615 C16orf47Q6ZP98 133 aaPredicted RBP2.85□□□□□ -1.95
SEC23A-207ENST00000554615 C1orf229Q6ZS94 237 aaPredicted RBP2.85□□□□□ -1.95
SEC23A-207ENST00000554615 TMEM183AQ8IXX5 376 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 CD177Q8N6Q3 437 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 OR10V1Q8NGI7 309 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 TMED6Q8WW62 240 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 WNT2BQ93097 391 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 ZNF503Q96F45 646 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 PGAM5Q96HS1 289 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 RITA1Q96K30 269 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 MICU1Q9BPX6 476 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 IFI27L2Q9H2X8 130 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 LAMP3Q9UQV4 416 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 SPAG17Q6Q759 2223 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 ZFHX4Q86UP3 3567 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 C5orf42Q9H799 3197 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 MED12LQ86YW9 2145 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 A0A1W2PNR3 127 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 SMIM27A0A1W2PRY6 76 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 C9J4A7 227 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 F5H0A9 414 aaPredicted RBP2.85□□□□□ -1.95
SEC23A-207ENST00000554615 LCE2BO14633 110 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 MRPS12O15235 138 aaKnown RBP2.85□□□□□ -1.95
SEC23A-207ENST00000554615 IGLV2-23P01705 113 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 MBP02144 154 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 APOHP02749 345 aaPredicted RBP2.85□□□□□ -1.95
SEC23A-207ENST00000554615 JMJD7P0C870 316 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 NFYBP25208 207 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 ITGA3P26006 1051 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 PPP1CCP36873 323 aaKnown RBP2.85□□□□□ -1.95
SEC23A-207ENST00000554615 RPL29P47914 159 aaKnown RBP2.85□□□□□ -1.95
SEC23A-207ENST00000554615 GNG3P63215 75 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 TNFRSF9Q07011 255 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 SLC10A1Q14973 349 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 NNATQ16517 81 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 ZNF672Q499Z4 452 aaPredicted RBP2.85□□□□□ -1.95
SEC23A-207ENST00000554615 SPATA46Q5T0L3 261 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 PRAMEF20Q5VT98 475 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 FBXW9Q5XUX1 488 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 ZNF585AQ6P3V2 769 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 SZRD1Q7Z422 152 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 CISD2Q8N5K1 135 aaKnown RBP2.85□□□□□ -1.95
SEC23A-207ENST00000554615 TVP23CQ96ET8 276 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 SLC35E1Q96K37 410 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 EMC6Q9BV81 110 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 PBDC1Q9BVG4 233 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 ZMAT5Q9UDW3 170 aaKnown RBP2.85□□□□□ -1.95
SEC23A-207ENST00000554615 PRELID1Q9Y255 219 aa2.85□□□□□ -1.95
SEC23A-207ENST00000554615 POLR3KQ9Y2Y1 108 aaPredicted RBP2.85□□□□□ -1.95
SEC23A-207ENST00000554615 DMDP11532 3685 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 BORCS7-ASMTA0A0B4J1R7 106 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 OOEPA6NGQ2 149 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 F6UZH7 168 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 MPIG6BO95866 241 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 OR5G3P0C626 314 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 IGHV1-2P23083 117 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 TIMP3P35625 211 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 FOLR3P41439 243 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 CCL11P51671 97 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 CARD18P57730 90 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 POLR2GP62487 172 aaKnown RBP eCLIP2.84□□□□□ -1.95
SEC23A-207ENST00000554615 C2orf83Q53S99 150 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 IGSF11Q5DX21 431 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 CT83Q5H943 113 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 ACSM6Q6P461 480 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 SLC22A25Q6T423 547 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 WDR82Q6UXN9 313 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 GALNTL5Q7Z4T8 443 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 GCSAMQ8N6F7 178 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 POM121L12Q8N7R1 296 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 OR1L8Q8NGR8 309 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 OR14L1PQ8NHC6 308 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 RAB39BQ96DA2 213 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 BTF3L4Q96K17 158 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 C20orf144Q9BQM9 153 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 ULBP2Q9BZM5 246 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 CHIAQ9BZP6 476 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 PRSS22Q9GZN4 317 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 PARP12Q9H0J9 701 aaKnown RBP2.84□□□□□ -1.95
SEC23A-207ENST00000554615 SAV1Q9H4B6 383 aaPredicted RBP2.84□□□□□ -1.95
SEC23A-207ENST00000554615 BANF2Q9H503 90 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 ZNF552Q9H707 407 aaPredicted RBP2.84□□□□□ -1.95
SEC23A-207ENST00000554615 CRLF2Q9HC73 371 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 TMEM9BQ9NQ34 198 aa2.84□□□□□ -1.95
SEC23A-207ENST00000554615 LIN7CQ9NUP9 197 aaKnown RBP2.84□□□□□ -1.95
SEC23A-207ENST00000554615 ASF1BQ9NVP2 202 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms