RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 JKAMPQ9P055 326 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 CRPP02741 224 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 ZNF343Q6P1L6 599 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 ZNF66Q6ZN08 573 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 SEH1LQ96EE3 360 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 MS4A3Q96HJ5 214 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 VSTM2LQ96N03 204 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 ISG20L2Q9H9L3 353 aaKnown RBP2.89□□□□□ -1.95
SYNE2-212ENST00000554584 TCRBV3S1A0A5B6 114 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 PAGE4O60829 102 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 HAND1O96004 215 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 HIST1H1CP16403 213 aaKnown RBP2.89□□□□□ -1.95
SYNE2-212ENST00000554584 GNG4P50150 75 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 MRPS21P82921 87 aaKnown RBP2.89□□□□□ -1.95
SYNE2-212ENST00000554584 LIPNQ5VXI9 398 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 LIAT1Q6ZQX7 453 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 LINC00518Q8N0U6 118 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 OR10P1Q8NGE3 313 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 PSORS1C1Q9UIG5 152 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 ELOBQ15370 118 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 R3HDM4Q96D70 268 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 RHOVQ96L33 236 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 GEMIN7Q9H840 131 aaKnown RBP2.89□□□□□ -1.95
SYNE2-212ENST00000554584 TRAV25A0A0B4J276 109 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 SLC6A1P30531 599 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 BRS3P32247 399 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 PRR30Q53SZ7 412 aaPredicted RBP2.89□□□□□ -1.95
SYNE2-212ENST00000554584 TPTE2P1Q5T6R2 138 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 ATG4DQ86TL0 474 aaPredicted RBP2.89□□□□□ -1.95
SYNE2-212ENST00000554584 TRAF4Q9BUZ4 470 aaPredicted RBP2.89□□□□□ -1.95
SYNE2-212ENST00000554584 GPR35Q9HC97 309 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 MAP1LC3B2A6NCE7 125 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 C1QBP02746 253 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 SFTA3P0C7M3 94 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 LHFPL2Q6ZUX7 228 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 PAQR9Q6ZVX9 377 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 NOXO1Q8NFA2 376 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 OR2K2Q8NGT1 345 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 TOX2Q96NM4 488 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 MAP1LC3BQ9GZQ8 125 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 FCN1O00602 326 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 MOSP00540 346 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 LIFP15018 202 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 GALR1P47211 349 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 REEP5Q00765 189 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 SLC16A12Q6ZSM3 486 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 WFDC11Q8NEX6 87 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 C10orf71Q711Q0 1435 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 CST2P09228 141 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 CDKN2AP42771 156 aaKnown RBP2.89□□□□□ -1.95
SYNE2-212ENST00000554584 ZNF266Q14584 549 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 DERL3Q96Q80 235 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 GSX2Q9BZM3 304 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 TMEM38AQ9H6F2 299 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 METTL1Q9UBP6 276 aaKnown RBP2.89□□□□□ -1.95
SYNE2-212ENST00000554584 ADAMTS20P59510 1910 aa2.89□□□□□ -1.95
SYNE2-212ENST00000554584 TNFRSF1AP19438 455 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 KLF3P57682 345 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-212ENST00000554584 KIR2DS3Q14952 304 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 MICBQ29980 383 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 ZNF680Q8NEM1 530 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 APOBEC4Q8WW27 367 aaKnown RBP2.88□□□□□ -1.95
SYNE2-212ENST00000554584 GLIPR2Q9H4G4 154 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 SIGLEC9Q9Y336 463 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 CRYBG1Q9Y4K1 1723 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 ABCA3Q99758 1704 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 UBL3O95164 117 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 OR5AC1P0C628 307 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 ARRB2P32121 409 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 FOXA3P55318 350 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-212ENST00000554584 PPP1CBP62140 327 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 C2orf83Q53S99 150 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 SLCO4C1Q6ZQN7 724 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 OR52N4Q8NGI2 321 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-212ENST00000554584 MBD3L4A6NDZ8 208 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-212ENST00000554584 MBD3L3A6NE82 208 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-212ENST00000554584 MBD3L5A6NJ08 208 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-212ENST00000554584 SS18L1O75177 396 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-212ENST00000554584 PAPLNO95428 1278 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 CD8AP01732 235 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 PSMB6P28072 239 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 SLC25A35Q3KQZ1 300 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 DOLPP1Q86YN1 238 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 MBD3L2Q8NHZ7 208 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-212ENST00000554584 DAPP1Q9UN19 280 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 SNURFLB1AK76 121 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 PMS2P2O95744 297 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 ITGBL1O95965 494 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-212ENST00000554584 C17orf67Q0P5P2 114 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 FRMPD3Q5JV73 1810 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 CLLU1Q5K131 121 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 TAF1LQ8IZX4 1826 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 CLRN3Q8NCR9 226 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 FAM210BQ96KR6 192 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 C7orf69Q9H7B7 122 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 KLK4Q9Y5K2 254 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 HIST1H1TP22492 207 aaPredicted RBP2.88□□□□□ -1.95
SYNE2-212ENST00000554584 LIM2P55344 173 aa2.88□□□□□ -1.95
SYNE2-212ENST00000554584 PIGPP57054 158 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms