RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 LGALS9O00182 355 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 BHLHE40O14503 412 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 SS18L1O75177 396 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-211ENST00000554437 DHFRP00374 187 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 GUSBP08236 651 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 NBEAP1P0C6P0 100 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 HIST1H1TP22492 207 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-211ENST00000554437 IMPA1P29218 277 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 SERPINB1P30740 379 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 MAP2K4P45985 399 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 GABRA4P48169 554 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 GNG3P63215 75 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 HLA-DRB3P79483 266 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 FABP5Q01469 135 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 JOSD1Q15040 202 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-211ENST00000554437 MPV17L2Q567V2 206 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 GUSBP11Q6P575 273 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 TMEM205Q6UW68 189 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 FAM19A3Q7Z5A8 133 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 DOLPP1Q86YN1 238 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 H1FOOQ8IZA3 346 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-211ENST00000554437 TMEM35BQ8NCS4 154 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 OR11H1Q8NG94 326 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 OR11H2Q8NH07 326 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 OR1L1Q8NH94 360 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 ZNRF2Q8NHG8 242 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 ANKRD36BP1Q96IX9 119 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 FOPNLQ96NB1 174 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 PLEKHF2Q9H8W4 249 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 BIN3Q9NQY0 253 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 IDI2-AS1Q9NZ38 188 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 ANGPT4Q9Y264 503 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 PKIGQ9Y2B9 76 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 UFC1Q9Y3C8 167 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 MYO10Q9HD67 2058 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 IGLV1-50A0A075B6I6 118 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 IGHV1OR15-9A0A0B4J2B8 117 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 TMEM72A0PK05 275 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 C9JQL5 133 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 TSTD3H0UI37 97 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 TMEM250H0YL14 139 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 CHST10O43529 356 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 EIF1BO60739 113 aaKnown RBP3.01□□□□□ -1.93
SCFD1-211ENST00000554437 ATG12O94817 140 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 S1PR2O95136 353 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 WISP3O95389 354 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-211ENST00000554437 TTRP02766 147 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 CRYGDP07320 174 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 FAM228BP0C875 321 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 OR13C7P0DN81 318 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 EIF1P41567 113 aaKnown RBP3.01□□□□□ -1.93
SCFD1-211ENST00000554437 ZNF136P52737 540 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 RWDD2BP57060 319 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 TCTAP57738 103 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 RAP1AP62834 184 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 TMEM267Q0VDI3 215 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-211ENST00000554437 ELOCQ15369 112 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 FAM201AQ5SY85 155 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 TEX36Q5VZQ5 186 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 ALKAL1Q6UXT8 129 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 Q6ZRU5 148 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 ATP5L2Q7Z4Y8 100 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 SLC35F6Q8N357 371 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 SMIM20Q8N5G0 67 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 UBL4BQ8N7F7 174 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 OR9I1Q8NGQ6 314 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 OR51H1Q8NH63 302 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 OR10A6Q8NH74 314 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 OR13C6PQ8NH95 151 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 BMFQ96LC9 184 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 PPP1R2P1Q96PQ5 205 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 FGF23Q9GZV9 251 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-211ENST00000554437 IFI27L2Q9H2X8 130 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 LINC00527Q9UJ94 153 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 UTP11Q9Y3A2 253 aaKnown RBP3.01□□□□□ -1.93
SCFD1-211ENST00000554437 ZNF706Q9Y5V0 76 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-211ENST00000554437 NPATQ14207 1427 aa3.01□□□□□ -1.93
SCFD1-211ENST00000554437 KIF15Q9NS87 1388 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 LOC102724200A0A096LPH7 203 aaPredicted RBP3□□□□□ -1.93
SCFD1-211ENST00000554437 TRAV8-1A0A0A6YYK1 113 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 OR5H1A6NKK0 313 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 F5H5P2 479 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 ISLRO14498 428 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 PDE6DO43924 150 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 IGHV3-11P01762 117 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 CRHP06850 196 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 OR12D1P0DN82 309 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 IFI30P13284 250 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 CTSEP14091 401 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 IDO1P14902 403 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 CTLA4P16410 223 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 CD34P28906 385 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 MPIP34949 423 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 CTBP2P56545 445 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 EIF4EBP1Q13541 118 aaPredicted RBP3□□□□□ -1.93
SCFD1-211ENST00000554437 SMCO1Q147U7 214 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 DEFB116Q30KQ4 102 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 LINC00303Q3SY05 128 aa3□□□□□ -1.93
SCFD1-211ENST00000554437 ABCA11PQ4W5N1 156 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms