RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 DYNAPQ8N1N2 210 aa13.34□□□□□ -0.27
NEK9-204ENST00000554258 SAMD12Q8N8I0 201 aa13.34□□□□□ -0.27
NEK9-204ENST00000554258 PLPPR1Q8TBJ4 325 aa13.34□□□□□ -0.27
NEK9-204ENST00000554258 CORO2AQ92828 525 aa13.34□□□□□ -0.27
NEK9-204ENST00000554258 CYYR1Q96J86 154 aa13.34□□□□□ -0.27
NEK9-204ENST00000554258 P2RX4Q99571 388 aa13.34□□□□□ -0.27
NEK9-204ENST00000554258 SULT4A1Q9BR01 284 aa13.34□□□□□ -0.27
NEK9-204ENST00000554258 DCUN1D5Q9BTE7 237 aa13.34□□□□□ -0.27
NEK9-204ENST00000554258 PECRQ9BY49 303 aa13.34□□□□□ -0.27
NEK9-204ENST00000554258 CHST6Q9GZX3 395 aa13.34□□□□□ -0.27
NEK9-204ENST00000554258 MIXL1Q9H2W2 232 aa13.34□□□□□ -0.27
NEK9-204ENST00000554258 FUOMA2VDF0 154 aa13.33□□□□□ -0.28
NEK9-204ENST00000554258 MFNGO00587 321 aa13.33□□□□□ -0.28
NEK9-204ENST00000554258 CTDSP2O14595 271 aa13.33□□□□□ -0.28
NEK9-204ENST00000554258 SLC25A17O43808 307 aa13.33□□□□□ -0.28
NEK9-204ENST00000554258 P2RX3P56373 397 aa13.33□□□□□ -0.28
NEK9-204ENST00000554258 RPL23AP62750 156 aaKnown RBP13.33□□□□□ -0.28
NEK9-204ENST00000554258 ZNF497Q6ZNH5 498 aa13.33□□□□□ -0.28
NEK9-204ENST00000554258 GDPD3Q7L5L3 318 aa13.33□□□□□ -0.28
NEK9-204ENST00000554258 LHFPL4Q7Z7J7 247 aa13.33□□□□□ -0.28
NEK9-204ENST00000554258 RTN4RL2Q86UN3 420 aa13.33□□□□□ -0.28
NEK9-204ENST00000554258 RAB3CQ96E17 227 aa13.33□□□□□ -0.28
NEK9-204ENST00000554258 S100A16Q96FQ6 103 aaKnown RBP13.33□□□□□ -0.28
NEK9-204ENST00000554258 ARHGAP5-AS1Q96IT6 56 aa13.33□□□□□ -0.28
NEK9-204ENST00000554258 FAAP24Q9BTP7 215 aa13.33□□□□□ -0.28
NEK9-204ENST00000554258 HEXA-AS1Q9H8Q6 139 aa13.33□□□□□ -0.28
NEK9-204ENST00000554258 PLEKHJ1Q9NW61 149 aa13.33□□□□□ -0.28
NEK9-204ENST00000554258 XRCC3O43542 346 aa13.32□□□□□ -0.28
NEK9-204ENST00000554258 HPGDSO60760 199 aa13.32□□□□□ -0.28
NEK9-204ENST00000554258 MT-ND4P03905 459 aa13.32□□□□□ -0.28
NEK9-204ENST00000554258 EIF4EP06730 217 aaKnown RBP13.32□□□□□ -0.28
NEK9-204ENST00000554258 CGB3P0DN86 165 aa13.32□□□□□ -0.28
NEK9-204ENST00000554258 CGB7P0DN87 165 aa13.32□□□□□ -0.28
NEK9-204ENST00000554258 HIST1H1DP16402 221 aaKnown RBP13.32□□□□□ -0.28
NEK9-204ENST00000554258 ELK1P19419 428 aa13.32□□□□□ -0.28
NEK9-204ENST00000554258 COX7A1P24310 79 aa13.32□□□□□ -0.28
NEK9-204ENST00000554258 GLIPR1P48060 266 aa13.32□□□□□ -0.28
NEK9-204ENST00000554258 RPL31P62899 125 aaKnown RBP13.32□□□□□ -0.28
NEK9-204ENST00000554258 AESQ08117 197 aa13.32□□□□□ -0.28
NEK9-204ENST00000554258 ARL6IP1Q15041 203 aa13.32□□□□□ -0.28
NEK9-204ENST00000554258 ZNF260Q3ZCT1 412 aa13.32□□□□□ -0.28
NEK9-204ENST00000554258 MCFD2Q8NI22 146 aa13.32□□□□□ -0.28
NEK9-204ENST00000554258 DIABLOQ9NR28 239 aa13.32□□□□□ -0.28
NEK9-204ENST00000554258 C19orf12Q9NSK7 152 aa13.32□□□□□ -0.28
NEK9-204ENST00000554258 KMT2AQ03164 3969 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 TRBV6-6A0A0A6YYG2 114 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 ODAMA1E959 279 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 HSPB6O14558 160 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 TPPPO94811 219 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 NAPSAO96009 420 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 GSTP1P09211 210 aaKnown RBP13.31□□□□□ -0.28
NEK9-204ENST00000554258 CDK2P24941 298 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 SLC6A1P30531 599 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 MNDAP41218 407 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 ATXN7L3Q14CW9 347 aaPredicted RBP13.31□□□□□ -0.28
NEK9-204ENST00000554258 CDNFQ49AH0 187 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 KRBOX4Q5JUW0 171 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 TMEM200BQ69YZ2 307 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 C18orf65Q6ZTR6 163 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 TCF23Q7RTU1 214 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 OR4M1Q8NGD0 313 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 DUX3Q96PT4 197 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 TM2D3Q9BRN9 247 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 ETAA1Q9NY74 926 aa13.31□□□□□ -0.28
NEK9-204ENST00000554258 hADV38S2A0JD32 116 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 TMEM30CPA0ZSE6 113 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 UBE2QL1A1L167 161 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 SERPINE3A8MV23 424 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 LPLP06858 475 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 DLX6P56179 175 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 EDDM3BP56851 147 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 EDDM3AQ14507 147 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 CNPY1Q3B7I2 92 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 ZNF880Q6PDB4 577 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 C11orf42Q8N5U0 333 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 TPRX1Q8N7U7 411 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 KLHL30-AS1Q8NEE0 82 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 RIMS4Q9H426 269 aaPredicted RBP13.3□□□□□ -0.28
NEK9-204ENST00000554258 AUNIPQ9H7T9 357 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 LINC00574Q9H8X3 128 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 AK3Q9UIJ7 227 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 KIF25Q9UIL4 384 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 LINC00312Q9Y6C7 94 aa13.3□□□□□ -0.28
NEK9-204ENST00000554258 TRAV18A0A075B6X5 111 aa13.29□□□□□ -0.28
NEK9-204ENST00000554258 SEC14L6B5MCN3 397 aa13.29□□□□□ -0.28
NEK9-204ENST00000554258 HLA-DQB1P01920 261 aa13.29□□□□□ -0.28
NEK9-204ENST00000554258 GNB3P16520 340 aa13.29□□□□□ -0.28
NEK9-204ENST00000554258 SSX2Q16385 188 aa13.29□□□□□ -0.28
NEK9-204ENST00000554258 PNLIPRP3Q17RR3 467 aa13.29□□□□□ -0.28
NEK9-204ENST00000554258 HACD4Q5VWC8 232 aa13.29□□□□□ -0.28
NEK9-204ENST00000554258 FAM185AQ8N0U4 392 aa13.29□□□□□ -0.28
NEK9-204ENST00000554258 OR5M8Q8NGP6 311 aa13.29□□□□□ -0.28
NEK9-204ENST00000554258 MRPL30Q8TCC3 161 aaKnown RBP13.29□□□□□ -0.28
NEK9-204ENST00000554258 NEK7Q8TDX7 302 aa13.29□□□□□ -0.28
NEK9-204ENST00000554258 SOSTQ9BQB4 213 aa13.29□□□□□ -0.28
NEK9-204ENST00000554258 MBNL3Q9NUK0 354 aaKnown RBP13.29□□□□□ -0.28
NEK9-204ENST00000554258 TAS2R3Q9NYW6 316 aa13.29□□□□□ -0.28
NEK9-204ENST00000554258 OR6C3Q9NZP0 311 aa13.29□□□□□ -0.28
NEK9-204ENST00000554258 UBE2J1Q9Y385 318 aaPredicted RBP13.29□□□□□ -0.28
NEK9-204ENST00000554258 MEIKINA0A087WXM9 373 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 350.2 ms