RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 OR4E1P0C645 316 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 TRAPPC2P0DI81 140 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 TRAPPC2BP0DI82 140 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 IGHV1-8P0DP01 117 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 IGKV1-13P0DP09 117 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 CCL3L1P16619 93 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 ANXA7P20073 488 aaKnown RBP6.29□□□□□ -1.4
TDP1-209ENST00000554180 CD34P28906 385 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 GNRHRP30968 328 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 PPP1CCP36873 323 aaKnown RBP6.29□□□□□ -1.4
TDP1-209ENST00000554180 RAB25P57735 213 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 RND3P61587 244 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 DHODHQ02127 395 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 NOTCH2Q04721 2471 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 BAMBIQ13145 260 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 GNMTQ14749 295 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 ABCA11PQ4W5N1 156 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 MORN2Q502X0 79 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 C4orf46Q504U0 113 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 PRAMEF5Q5TYX0 476 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 C5orf24Q7Z6I8 188 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 TMED4Q7Z7H5 227 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 ZNF645Q8N7E2 425 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.29□□□□□ -1.4
TDP1-209ENST00000554180 ZNF439Q8NDP4 499 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 BVESQ8NE79 360 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 UBALD1Q8TB05 177 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 SECTM1Q8WVN6 248 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 TNFRSF14Q92956 283 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 DACT3Q96B18 629 aaPredicted RBP6.29□□□□□ -1.4
TDP1-209ENST00000554180 GALNT14Q96FL9 552 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 AGMATQ9BSE5 352 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 RTBDNQ9BSG5 229 aaPredicted RBP6.29□□□□□ -1.4
TDP1-209ENST00000554180 SLC5A7Q9GZV3 580 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 UNKLQ9H9P5 680 aaKnown RBP6.29□□□□□ -1.4
TDP1-209ENST00000554180 SLC2A9Q9NRM0 540 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 ALG5Q9Y673 324 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 SESN1Q9Y6P5 492 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 DSCAML1Q8TD84 2053 aa6.29□□□□□ -1.4
TDP1-209ENST00000554180 A0A0A6YYJ9 748 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 IGHV3-43A0A0B4J1X8 118 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 PIGBOS1A0A0B4J2F0 54 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 IGHV4-61A0A0C4DH41 118 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 IGHV2-70DA0A0C4DH43 119 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 MEX3AA1L020 520 aaKnown RBP6.28□□□□□ -1.4
TDP1-209ENST00000554180 CRYM-AS1A6NIL9 109 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 DUS4LO95620 317 aaKnown RBP6.28□□□□□ -1.4
TDP1-209ENST00000554180 HLA-AP01891 365 aaKnown RBP6.28□□□□□ -1.4
TDP1-209ENST00000554180 OR8U9P0C7N5 309 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 IGHV3-43DP0DP04 118 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 VSIG10L2P0DP72 767 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 USF1P22415 310 aaPredicted RBP6.28□□□□□ -1.4
TDP1-209ENST00000554180 OMGP23515 440 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 BCAP31P51572 246 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 PIGPP57054 158 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 PAX2Q02962 417 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 DHRS2Q13268 280 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 PPP1R1AQ13522 171 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 Q5PR19 223 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 ZNF626Q68DY1 528 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 ZNF818PQ6ZRF7 136 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 SLC25A48Q6ZT89 311 aaKnown RBP6.28□□□□□ -1.4
TDP1-209ENST00000554180 KCTD9Q7L273 389 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 LYG2Q86SG7 212 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 LDLRAD3Q86YD5 345 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 SGPP2Q8IWX5 399 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 CADM3Q8N126 398 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 C11orf42Q8N5U0 333 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 LINC00311Q8N616 119 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 ADAD2Q8NCV1 583 aaKnown RBP6.28□□□□□ -1.4
TDP1-209ENST00000554180 OR8U1Q8NH10 309 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 ZNF596Q8TC21 504 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 ZNF431Q8TF32 576 aaPredicted RBP6.28□□□□□ -1.4
TDP1-209ENST00000554180 CHAC2Q8WUX2 184 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 RTN4IP1Q8WWV3 396 aaPredicted RBP6.28□□□□□ -1.4
TDP1-209ENST00000554180 TMEM230Q96A57 120 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 C1orf159Q96HA4 380 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 ABHD14AQ9BUJ0 271 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 PARP12Q9H0J9 701 aaKnown RBP6.28□□□□□ -1.4
TDP1-209ENST00000554180 OR2D2Q9H210 308 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 OR51J1Q9H342 316 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 METTL8Q9H825 291 aaKnown RBP6.28□□□□□ -1.4
TDP1-209ENST00000554180 ZNF221Q9UK13 617 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 GAB2Q9UQC2 676 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 RBM7Q9Y580 266 aaKnown RBP6.28□□□□□ -1.4
TDP1-209ENST00000554180 KPTNQ9Y664 436 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 ITPR2Q14571 2701 aa6.28□□□□□ -1.4
TDP1-209ENST00000554180 hCG_2014768A0A024R1R8 64 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 A0A096LNT2 108 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 A0A0B4J2A0 478 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 C9orf170A2RU37 121 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 RNF212BA8MTL3 300 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 MMP23AO75900 390 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 ANXA3P12429 323 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 AKR1C4P17516 323 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 PI3P19957 117 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 VAMP1P23763 118 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 NFYBP25208 207 aa6.27□□□□□ -1.41
TDP1-209ENST00000554180 ZFP36P26651 326 aaKnown RBP6.27□□□□□ -1.41
TDP1-209ENST00000554180 ERVFRD-1P60508 538 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms