RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SLC35F2Q8IXU6 374 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 DEFB107AQ8IZN7 70 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 PGAM4Q8N0Y7 254 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 FAM58AQ8N1B3 248 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 MINDY2Q8NBR6 621 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 OR51A2Q8NGJ7 313 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 OR51T1Q8NGJ9 327 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 OR10K1Q8NGX5 313 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 OR2T29Q8NH02 315 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 OR8U1Q8NH10 309 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 OR9G1Q8NH87 305 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 CT45A3Q8NHU0 189 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 MRGPRDQ8TDS7 321 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 C2CD4CQ8TF44 421 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 TOMM40LQ969M1 308 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 ORAI1Q96D31 301 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 NSMCE2Q96MF7 247 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 SIKE1Q9BRV8 207 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 YIPF3Q9GZM5 350 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 NDEL1Q9GZM8 345 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 CHST5Q9GZS9 411 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 PARP12Q9H0J9 701 aaKnown RBP2.36□□□□□ -2.03
SLIRP-202ENST00000553981 EFCAB1Q9HAE3 211 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 SLC25A19Q9HC21 320 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 ABCB9Q9NP78 766 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 LIN7CQ9NUP9 197 aaKnown RBP2.36□□□□□ -2.03
SLIRP-202ENST00000553981 TAS2R3Q9NYW6 316 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 CALYQ9NYX4 217 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 TVP23BQ9NYZ1 205 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 KIF25Q9UIL4 384 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 LAMP5Q9UJQ1 280 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 BAIAP2Q9UQB8 552 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 SAMHD1Q9Y3Z3 626 aaKnown RBP2.36□□□□□ -2.03
SLIRP-202ENST00000553981 TNCP24821 2201 aa2.36□□□□□ -2.03
SLIRP-202ENST00000553981 A0A1B0GU03 582 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 LOC107986453A0A1B0GWG9 222 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 hCG_1809904A0A1W2PP81 198 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 A0A1W2PPE2 198 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 A0A1W2PPH5 198 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 A0A1W2PQL4 384 aaPredicted RBP2.35□□□□□ -2.03
SLIRP-202ENST00000553981 A0A1W2PR64 198 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 A0A1W2PRV1 198 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 RIIAD1A6NNX1 92 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 HMGB1P1B2RPK0 211 aaPredicted RBP2.35□□□□□ -2.03
SLIRP-202ENST00000553981 E9PI62 339 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 LOC110117498-PIK3R3F6TDL0 507 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 H3BN98 237 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 J3QRE1 110 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 OVOL1O14753 267 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 HSD17B6O14756 317 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 ARPC1BO15143 372 aaKnown RBP2.35□□□□□ -2.03
SLIRP-202ENST00000553981 LDLRAD4O15165 306 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 SAP30O75446 220 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 CLIC3O95833 236 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 IFNGP01579 166 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 IL1AP01583 271 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 IGLV1-51P01701 117 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 IGHV3-11P01762 117 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 APOC1P02654 83 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 CSTBP04080 98 aaKnown RBP2.35□□□□□ -2.03
SLIRP-202ENST00000553981 ALDOBP05062 364 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 CSN3P07498 182 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 CD7P09564 240 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 PAICSP22234 425 aaKnown RBP2.35□□□□□ -2.03
SLIRP-202ENST00000553981 BLVRBP30043 206 aaPredicted RBP2.35□□□□□ -2.03
SLIRP-202ENST00000553981 BRS3P32247 399 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 PTGFRP43088 359 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 GLP1RP43220 463 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 PCP4P48539 62 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 FUT6P51993 359 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 RIDAP52758 137 aaKnown RBP2.35□□□□□ -2.03
SLIRP-202ENST00000553981 SMIM11AP58511 58 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 TNFRSF9Q07011 255 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 SCN1BQ07699 218 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF616Q08AN1 781 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 GNMTQ14749 295 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 PTGES3Q15185 160 aaKnown RBP2.35□□□□□ -2.03
SLIRP-202ENST00000553981 ZSCAN26Q16670 478 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 TP53I3Q53FA7 332 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 SLC35D3Q5M8T2 416 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 SAMD4BQ5PRF9 694 aaKnown RBP2.35□□□□□ -2.03
SLIRP-202ENST00000553981 C12orf73Q69YU5 71 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 KCTD18Q6PI47 426 aaPredicted RBP2.35□□□□□ -2.03
SLIRP-202ENST00000553981 DEGS2Q6QHC5 323 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 ZBTB49Q6ZSB9 765 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 CPLX4Q7Z7G2 160 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 TRAPPC6BQ86SZ2 158 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 MOB3BQ86TA1 216 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 COMMD2Q86X83 199 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 TGIF2LXQ8IUE1 241 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 LINC00311Q8N616 119 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 TCEANCQ8N8B7 351 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 ZNF485Q8NCK3 441 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 OR1L1Q8NH94 360 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 TEX47Q8TBZ9 253 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 GIPC3Q8TF64 312 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 CANT1Q8WVQ1 401 aa2.35□□□□□ -2.03
SLIRP-202ENST00000553981 RTN4IP1Q8WWV3 396 aaPredicted RBP2.35□□□□□ -2.03
SLIRP-202ENST00000553981 RGP1Q92546 391 aaPredicted RBP2.35□□□□□ -2.03
SLIRP-202ENST00000553981 RPEQ96AT9 228 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms