RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 VHLLQ6RSH7 139 aa12.85□□□□□ -0.35
ABCD4-218ENST00000553486 EIF4E3Q8N5X7 224 aaKnown RBP12.85□□□□□ -0.35
ABCD4-218ENST00000553486 TMEM171Q8WVE6 324 aa12.85□□□□□ -0.35
ABCD4-218ENST00000553486 GALMQ96C23 342 aa12.85□□□□□ -0.35
ABCD4-218ENST00000553486 ABHD14BQ96IU4 210 aa12.85□□□□□ -0.35
ABCD4-218ENST00000553486 LURAP1Q96LR2 239 aa12.85□□□□□ -0.35
ABCD4-218ENST00000553486 SEBOXQ9HB31 216 aaPredicted RBP12.85□□□□□ -0.35
ABCD4-218ENST00000553486 OR2S2Q9NQN1 319 aa12.85□□□□□ -0.35
ABCD4-218ENST00000553486 ARID1AO14497 2285 aa12.85□□□□□ -0.35
ABCD4-218ENST00000553486 ZSCAN5BA6NJL1 495 aa12.84□□□□□ -0.35
ABCD4-218ENST00000553486 SRRM5B3KS81 715 aa12.84□□□□□ -0.35
ABCD4-218ENST00000553486 ATP6V1G2-DDX39BF2Z307 99 aa12.84□□□□□ -0.35
ABCD4-218ENST00000553486 C16orf97H3BN30 126 aa12.84□□□□□ -0.35
ABCD4-218ENST00000553486 C19orf84I3L1E1 186 aa12.84□□□□□ -0.35
ABCD4-218ENST00000553486 OR3A1P47881 315 aa12.84□□□□□ -0.35
ABCD4-218ENST00000553486 AESQ08117 197 aa12.84□□□□□ -0.35
ABCD4-218ENST00000553486 SSX8Q7RTT4 187 aa12.84□□□□□ -0.35
ABCD4-218ENST00000553486 RNF141Q8WVD5 230 aa12.84□□□□□ -0.35
ABCD4-218ENST00000553486 GPHA2Q96T91 129 aa12.84□□□□□ -0.35
ABCD4-218ENST00000553486 RCL1Q9Y2P8 373 aaKnown RBP12.84□□□□□ -0.35
ABCD4-218ENST00000553486 F8P00451 2351 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 FGF16O43320 207 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 JTBO76095 146 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 GAPDHP04406 335 aaKnown RBP12.83□□□□□ -0.35
ABCD4-218ENST00000553486 SERPINE2P07093 398 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 FGF2P09038 288 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 PVALBP20472 110 aaPredicted RBP12.83□□□□□ -0.35
ABCD4-218ENST00000553486 CD40P25942 277 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 IL2RGP31785 369 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 PRDX2P32119 198 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 NKX2-1P43699 371 aaPredicted RBP12.83□□□□□ -0.35
ABCD4-218ENST00000553486 KRBOX4Q5JUW0 171 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 ZNF295-AS1Q8N0V1 137 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 MEGF10Q96KG7 1140 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 OR2V2Q96R30 315 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 VKORC1Q9BQB6 163 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 FBXL17Q9UF56 701 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 KCNS2Q9ULS6 477 aa12.83□□□□□ -0.35
ABCD4-218ENST00000553486 A8MXK9 166 aa12.83□□□□□ -0.36
ABCD4-218ENST00000553486 ADAM20O43506 726 aa12.83□□□□□ -0.36
ABCD4-218ENST00000553486 GABRA2P47869 451 aa12.83□□□□□ -0.36
ABCD4-218ENST00000553486 TMEM33P57088 247 aa12.83□□□□□ -0.36
ABCD4-218ENST00000553486 PAX5Q02548 391 aa12.83□□□□□ -0.36
ABCD4-218ENST00000553486 NMSQ5H8A3 153 aa12.83□□□□□ -0.36
ABCD4-218ENST00000553486 RPL7L1Q6DKI1 246 aaKnown RBP12.83□□□□□ -0.36
ABCD4-218ENST00000553486 TRAT1Q6PIZ9 186 aa12.83□□□□□ -0.36
ABCD4-218ENST00000553486 OR51H1Q8NH63 302 aa12.83□□□□□ -0.36
ABCD4-218ENST00000553486 PPP1R35Q8TAP8 253 aa12.83□□□□□ -0.36
ABCD4-218ENST00000553486 UBALD1Q8TB05 177 aa12.83□□□□□ -0.36
ABCD4-218ENST00000553486 TMED6Q8WW62 240 aa12.83□□□□□ -0.36
ABCD4-218ENST00000553486 COQ2Q96H96 371 aa12.83□□□□□ -0.36
ABCD4-218ENST00000553486 BARX1Q9HBU1 254 aaPredicted RBP12.83□□□□□ -0.36
ABCD4-218ENST00000553486 HIVEP1P15822 2718 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 RNF212BA8MTL3 300 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 KRBOX1C9JBD0 128 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 C12orf77C9JDV5 145 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 OR8U9P0C7N5 309 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 PSG2P11465 335 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 ZP3P21754 424 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 TMEM108Q6UXF1 575 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 CD177Q8N6Q3 437 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 ZBTB34Q8NCN2 500 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 NUP37Q8NFH4 326 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 DMBX1Q8NFW5 382 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 OR8U1Q8NH10 309 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 OR1L1Q8NH94 360 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 TOLLIPQ9H0E2 274 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 PLEKHF2Q9H8W4 249 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 PPP1R3CQ9UQK1 317 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 CADP27708 2225 aa12.82□□□□□ -0.36
ABCD4-218ENST00000553486 SPRY3O43610 288 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 IGLV2-14P01704 120 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 HBZP02008 142 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 EGR1P18146 543 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 PTAFRP25105 342 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 HOXA4Q00056 320 aaPredicted RBP12.81□□□□□ -0.36
ABCD4-218ENST00000553486 MOGAT3Q86VF5 341 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 NINJ1Q92982 152 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 MRPL37Q9BZE1 423 aaKnown RBP12.81□□□□□ -0.36
ABCD4-218ENST00000553486 LIN7CQ9NUP9 197 aaKnown RBP12.81□□□□□ -0.36
ABCD4-218ENST00000553486 TAS2R3Q9NYW6 316 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 JKAMPQ9P055 326 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 METRNQ9UJH8 293 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 BORCS7-ASMTA0A0B4J1R7 106 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 SLC25A6P12236 298 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 MMP9P14780 707 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 CCKARP32238 428 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 GATA4P43694 442 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 C22orf34Q6ZV56 151 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 GCSAMQ8N6F7 178 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 BOLLQ8N9W6 283 aaKnown RBP12.81□□□□□ -0.36
ABCD4-218ENST00000553486 MRGPRDQ8TDS7 321 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 CA5BP1Q8WTZ4 195 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 ITLN1Q8WWA0 313 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 SNX22Q96L94 193 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 SPOCK3Q9BQ16 436 aa12.81□□□□□ -0.36
ABCD4-218ENST00000553486 A0A1B0GU03 582 aa12.8□□□□□ -0.36
ABCD4-218ENST00000553486 TEX46H3BTG2 121 aa12.8□□□□□ -0.36
ABCD4-218ENST00000553486 TFF1P04155 84 aa12.8□□□□□ -0.36
ABCD4-218ENST00000553486 TNFSF4P23510 183 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms