RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 SNRNP40Q96DI7 357 aaKnown RBP10□□□□□ -0.81
SYNE2-208ENST00000553289 HIGD1AQ9Y241 93 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 APCSP02743 223 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 MT-ND6P03923 174 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 HSPB1P04792 205 aaKnown RBP10□□□□□ -0.81
SYNE2-208ENST00000553289 SLC16A13Q7RTY0 426 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 CALHM1Q8IU99 346 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 TMEM251Q8N6I4 163 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 ZNF714Q96N38 554 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 CHRNA10Q9GZZ6 450 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 CLDN14O95500 239 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 C1QCP02747 245 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 UBE2V2Q15819 145 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 DGAT2L7PQ6IED9 249 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 DHRS11Q6UWP2 260 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 TMUB1Q9BVT8 246 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 NPDC1Q9NQX5 325 aaPredicted RBP10□□□□□ -0.81
SYNE2-208ENST00000553289 CLEC5AQ9NY25 188 aa10□□□□□ -0.81
SYNE2-208ENST00000553289 PATE3B3GLJ2 98 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 PPOXP50336 477 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 WDFY1Q8IWB7 410 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 SLC25A38Q96DW6 304 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 PCM1Q15154 2024 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 A0A087X0M5 115 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 A0A1B0GX30 115 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 SNURFLB1AK76 121 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 HYPMO75409 117 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 ZNF205O95201 554 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 CYB5R3P00387 301 aaPredicted RBP9.99□□□□□ -0.81
SYNE2-208ENST00000553289 HBZP02008 142 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 IL11P20809 199 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 DCAF12L2Q5VW00 463 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 AQP10Q96PS8 301 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 SLC25A33Q9BSK2 321 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 PAXXQ9BUH6 204 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 FAM206AQ9NX38 181 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 CDC42EP3Q9UKI2 254 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 PRSS53Q2L4Q9 553 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 RBPMS2Q6ZRY4 209 aaKnown RBP9.99□□□□□ -0.81
SYNE2-208ENST00000553289 SF3B6Q9Y3B4 125 aaKnown RBP9.99□□□□□ -0.81
SYNE2-208ENST00000553289 ZNF638Q14966 1978 aaKnown RBP9.99□□□□□ -0.81
SYNE2-208ENST00000553289 J3QW42 95 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 MELTFP08582 738 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 NMBP08949 121 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 PAFAH1B2P68402 229 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 MMDQ15546 238 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 MRPL54Q6P161 138 aaKnown RBP9.99□□□□□ -0.81
SYNE2-208ENST00000553289 P2RX4Q99571 388 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 PRDM14Q9GZV8 571 aa9.99□□□□□ -0.81
SYNE2-208ENST00000553289 ZFC3H1O60293 1989 aaKnown RBP9.98□□□□□ -0.81
SYNE2-208ENST00000553289 COMPP49747 757 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-208ENST00000553289 MESP2Q0VG99 397 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 OR1K1Q8NGR3 316 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 ZDHHC8Q9ULC8 765 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 IGHV3OR15-7A0A075B7D8 119 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 TRAV39A0A0B4J263 110 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 NDUFA2O43678 99 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 OR2H2O95918 312 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 CSN3P07498 182 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 NAT2P11245 290 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 HIST1H1BP16401 226 aaKnown RBP9.98□□□□□ -0.81
SYNE2-208ENST00000553289 MPV17P39210 176 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 ZNF880Q6PDB4 577 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 GBGT1Q8N5D6 347 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 WNT2BQ93097 391 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 DOCK5Q9H7D0 1870 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 TRAV34A0A0B4J273 112 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 ID1P41134 155 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 PKIAP61925 76 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 AMELYQ99218 206 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 OR5AC2Q9NZP5 309 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 LHFPL6Q9Y693 200 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 PXMP4Q9Y6I8 212 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 RCC1P18754 421 aaPredicted RBP9.98□□□□□ -0.81
SYNE2-208ENST00000553289 IER3P46695 156 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 RPL27AP46776 148 aaKnown RBP9.98□□□□□ -0.81
SYNE2-208ENST00000553289 P2RY4P51582 365 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 STARD6P59095 220 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 SCNM1Q9BWG6 230 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 ATAD5Q96QE3 1844 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 LRRC37AA6NMS7 1700 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 LOC390937A0A1W2PQ73 354 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 A6NDN8 102 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 STAG3L2P0CL84 134 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 FCARP24071 287 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 IGSF11Q5DX21 431 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 NSUN5P2Q63ZY6 315 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 WDR31Q8NA23 367 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 STARD4Q96DR4 205 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 ZNF488Q96MN9 340 aa9.98□□□□□ -0.81
SYNE2-208ENST00000553289 ZNF660Q6AZW8 331 aaPredicted RBP9.97□□□□□ -0.81
SYNE2-208ENST00000553289 C16orf82Q7Z2V1 217 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 LDLRAD3Q86YD5 345 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 FAM181AQ8N9Y4 354 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 DNASE2BQ8WZ79 361 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 UBTD1Q9HAC8 227 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 TREM2Q9NZC2 230 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 COL11A2P13942 1736 aaPredicted RBP9.97□□□□□ -0.81
SYNE2-208ENST00000553289 SPAARA0A1B0GVQ0 90 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms