RNA–Protein interactions for RNA: ENST00000552338.5

LIMA1-211, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-211ENST00000552338 ALX4Q9H161 411 aaPredicted RBP7.82□□□□□ -1.16
LIMA1-211ENST00000552338 TMEM160Q9NX00 188 aa7.82□□□□□ -1.16
LIMA1-211ENST00000552338 RDH8Q9NYR8 311 aa7.82□□□□□ -1.16
LIMA1-211ENST00000552338 GPR132Q9UNW8 380 aa7.82□□□□□ -1.16
LIMA1-211ENST00000552338 MYO9AB2RTY4 2548 aa7.82□□□□□ -1.16
LIMA1-211ENST00000552338 CREBBPQ92793 2442 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 IGHV2-26A0A0B4J1V2 119 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 OR5H14A6NHG9 310 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 ODF3BA8MYP8 253 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 J3QR06 171 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 M0QYG6 137 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 BET1O15155 118 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 NDUFB6O95139 128 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 PTTG1O95997 202 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 FSHBP01225 129 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 IGLV2-14P01704 120 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 AMY2AP04746 511 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 OMGP23515 440 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 FCGR2CP31995 323 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 UBE2E1P51965 193 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 KRTAP1-1Q07627 177 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 EIF4EBP1Q13541 118 aaPredicted RBP7.81□□□□□ -1.16
LIMA1-211ENST00000552338 RBMS2Q15434 407 aaKnown RBP7.81□□□□□ -1.16
LIMA1-211ENST00000552338 CT45A1Q5HYN5 189 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 METTL11BQ5VVY1 283 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 DCAF12L2Q5VW00 463 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 GLCCI1Q86VQ1 547 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 ODF3L1Q8IXM7 274 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 ABHD12Q8N2K0 398 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 CIARTQ8N365 385 aaPredicted RBP7.81□□□□□ -1.16
LIMA1-211ENST00000552338 MINDY2Q8NBR6 621 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 OR10V1Q8NGI7 309 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 OR51S1Q8NGJ8 323 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 OR13D1Q8NGV5 346 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 OR56B4Q8NH76 319 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 CT45A3Q8NHU0 189 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 IL1F10Q8WWZ1 152 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 SCGB3A2Q96PL1 93 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 GINS4Q9BRT9 223 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 ZNF2Q9BSG1 426 aaPredicted RBP7.81□□□□□ -1.16
LIMA1-211ENST00000552338 RSRP1Q9BUV0 290 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 TMUB1Q9BVT8 246 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 HIF1ANQ9NWT6 349 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 PIPOXQ9P0Z9 390 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 OR1A1Q9P1Q5 309 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 ZNF69Q9UC07 566 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 PSG11Q9UQ72 335 aa7.81□□□□□ -1.16
LIMA1-211ENST00000552338 RNASEK-C17orf49H0YIS7 233 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 LY6LH3BQJ8 138 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 HSPA12AO43301 675 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 CD5LO43866 347 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 PROP1O75360 226 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 TOX4O94842 621 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 TGFAP01135 160 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 TCRBP04435 133 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 AADACP22760 399 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 NFYAP23511 347 aaPredicted RBP7.8□□□□□ -1.16
LIMA1-211ENST00000552338 GNRHRP30968 328 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 PPP1CCP36873 323 aaKnown RBP7.8□□□□□ -1.16
LIMA1-211ENST00000552338 LUMP51884 338 aaPredicted RBP7.8□□□□□ -1.16
LIMA1-211ENST00000552338 PRRX1P54821 245 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 RND3P61587 244 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 TSPAN5P62079 268 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 DHODHQ02127 395 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 GNMTQ14749 295 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 OXA1LQ15070 435 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 HLA-DRB5Q30154 266 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 UTF1Q5T230 341 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 MINOS1Q5TGZ0 78 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 PRAMEF5Q5TYX0 476 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 ZNF782Q6ZMW2 699 aaPredicted RBP7.8□□□□□ -1.16
LIMA1-211ENST00000552338 VMO1Q7Z5L0 202 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 PRR18Q8N4B5 295 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 POC5Q8NA72 575 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 BVESQ8NE79 360 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 CREB3L1Q96BA8 519 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 C18orf12Q96KH6 178 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 ZNF251Q9BRH9 671 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 MARVELD1Q9BSK0 173 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 CLEC7AQ9BXN2 247 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 IFI27L2Q9H2X8 130 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 FAM212BQ9NTI7 297 aaPredicted RBP7.8□□□□□ -1.16
LIMA1-211ENST00000552338 GNG12Q9UBI6 72 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 AUP1Q9Y679 476 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 MINOS1-NBL1R4GNA1 71 aa7.8□□□□□ -1.16
LIMA1-211ENST00000552338 ITPR3Q14573 2671 aa7.79□□□□□ -1.16
LIMA1-211ENST00000552338 IGKV1D-13A0A0B4J2D9 117 aa7.79□□□□□ -1.16
LIMA1-211ENST00000552338 CENPVL3A0A0U1RRI6 287 aa7.79□□□□□ -1.16
LIMA1-211ENST00000552338 OOSP1A8MZH6 123 aa7.79□□□□□ -1.16
LIMA1-211ENST00000552338 RAB29O14966 203 aa7.79□□□□□ -1.16
LIMA1-211ENST00000552338 CTSDP07339 412 aaPredicted RBP7.79□□□□□ -1.16
LIMA1-211ENST00000552338 IGKV1-13P0DP09 117 aa7.79□□□□□ -1.16
LIMA1-211ENST00000552338 HOXB4P17483 251 aaPredicted RBP7.79□□□□□ -1.16
LIMA1-211ENST00000552338 UBE2MP61081 183 aaKnown RBP7.79□□□□□ -1.16
LIMA1-211ENST00000552338 MIDNQ504T8 468 aa7.79□□□□□ -1.16
LIMA1-211ENST00000552338 FAM53AQ6NSI3 398 aaPredicted RBP7.79□□□□□ -1.16
LIMA1-211ENST00000552338 FAAP20Q6NZ36 180 aa7.79□□□□□ -1.16
LIMA1-211ENST00000552338 FAHD2BQ6P2I3 314 aaPredicted RBP7.79□□□□□ -1.16
LIMA1-211ENST00000552338 IDO2Q6ZQW0 420 aa7.79□□□□□ -1.16
LIMA1-211ENST00000552338 C1orf229Q6ZS94 237 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms