RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 KIR2DS1Q14954 304 aa14.82□□□□□ -0.04
PRPF40B-216ENST00000552301 CT45A1Q5HYN5 189 aa14.82□□□□□ -0.04
PRPF40B-216ENST00000552301 C5orf24Q7Z6I8 188 aa14.82□□□□□ -0.04
PRPF40B-216ENST00000552301 TGIF2LXQ8IUE1 241 aa14.82□□□□□ -0.04
PRPF40B-216ENST00000552301 OR13F1Q8NGS4 319 aa14.82□□□□□ -0.04
PRPF40B-216ENST00000552301 CT45A3Q8NHU0 189 aa14.82□□□□□ -0.04
PRPF40B-216ENST00000552301 PRSS22Q9GZN4 317 aa14.82□□□□□ -0.04
PRPF40B-216ENST00000552301 SLC23A1Q9UHI7 598 aa14.82□□□□□ -0.04
PRPF40B-216ENST00000552301 KCNK7Q9Y2U2 307 aa14.82□□□□□ -0.04
PRPF40B-216ENST00000552301 IGHV1-3A0A0C4DH29 117 aa14.81□□□□□ -0.04
PRPF40B-216ENST00000552301 OR2F2O95006 317 aa14.81□□□□□ -0.04
PRPF40B-216ENST00000552301 FCGR3AP08637 254 aa14.81□□□□□ -0.04
PRPF40B-216ENST00000552301 TGFBR1P36897 503 aa14.81□□□□□ -0.04
PRPF40B-216ENST00000552301 SERPINB10P48595 397 aa14.81□□□□□ -0.04
PRPF40B-216ENST00000552301 C11orf88Q6PI97 169 aa14.81□□□□□ -0.04
PRPF40B-216ENST00000552301 Q6ZPA2 131 aa14.81□□□□□ -0.04
PRPF40B-216ENST00000552301 THNSL2Q86YJ6 484 aa14.81□□□□□ -0.04
PRPF40B-216ENST00000552301 TRDCB7Z8K6 153 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 M0QZK8 103 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 PEX14O75381 377 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 TMEM11P17152 192 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 ZBTB25P24278 435 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 ZNF134P52741 427 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 ZNF137PP52743 207 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 PROK1P58294 105 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 CDNFQ49AH0 187 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 LY6G6FQ5SQ64 297 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 OR5H6Q8NGV6 325 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 RTN4IP1Q8WWV3 396 aaPredicted RBP14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 EDARADDQ8WWZ3 215 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 CFHR4Q92496 578 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 RBM14Q96PK6 669 aaKnown RBP14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 SIGLEC9Q9Y336 463 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 MOB4Q9Y3A3 225 aa14.8□□□□□ -0.04
PRPF40B-216ENST00000552301 IGHV3-72A0A0B4J1Y9 119 aa14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 FABP7O15540 132 aa14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 IGKV1D-33P01593 117 aa14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 IGKV1-33P01594 117 aa14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 GSTP1P09211 210 aaKnown RBP14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 SCTP09683 121 aa14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 RPS19P39019 145 aaKnown RBP14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 GNG2P59768 71 aa14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 NCS1P62166 190 aa14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 GPR141Q7Z602 305 aa14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 OR4A4PQ8NGN8 299 aa14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 ST6GALNAC6Q969X2 333 aa14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 ZNF702PQ9H963 129 aa14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 SPATA2Q9UM82 520 aa14.79□□□□□ -0.04
PRPF40B-216ENST00000552301 FAM90A9PA6NNJ1 464 aa14.78□□□□□ -0.04
PRPF40B-216ENST00000552301 LANCL1O43813 399 aa14.78□□□□□ -0.04
PRPF40B-216ENST00000552301 CEACAM6P40199 344 aa14.78□□□□□ -0.04
PRPF40B-216ENST00000552301 VBP1P61758 197 aa14.78□□□□□ -0.04
PRPF40B-216ENST00000552301 PITPNAQ00169 270 aa14.78□□□□□ -0.04
PRPF40B-216ENST00000552301 HNF4GQ14541 408 aa14.78□□□□□ -0.04
PRPF40B-216ENST00000552301 IZUMO1Q8IYV9 350 aa14.78□□□□□ -0.04
PRPF40B-216ENST00000552301 DIABLOQ9NR28 239 aa14.78□□□□□ -0.04
PRPF40B-216ENST00000552301 PIPOXQ9P0Z9 390 aa14.78□□□□□ -0.04
PRPF40B-216ENST00000552301 OR1A1Q9P1Q5 309 aa14.78□□□□□ -0.04
PRPF40B-216ENST00000552301 TENM1Q9UKZ4 2725 aa14.77□□□□□ -0.04
PRPF40B-216ENST00000552301 A0A0A6YYH2 397 aa14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 TMEM235A6NFC5 223 aa14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 A6NJ64 397 aa14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 ST8SIA5O15466 376 aa14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 DTYMKP23919 212 aa14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 VDAC2P45880 294 aaPredicted RBP14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 HABP2Q14520 560 aaPredicted RBP14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 HACD4Q5VWC8 232 aa14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 OR2T10Q8NGZ9 312 aa14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 SGMS2Q8NHU3 365 aa14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 MAFIPQ8WZ33 124 aa14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 SLC25A38Q96DW6 304 aa14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 S1PR3Q99500 378 aa14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 IFI27L2Q9H2X8 130 aa14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 ZNF230Q9UIE0 474 aaPredicted RBP14.77□□□□□ -0.05
PRPF40B-216ENST00000552301 TRAV18A0A075B6X5 111 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 SAA2-SAA4A0A096LPE2 208 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 ITGB1BP1O14713 200 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 BET1O15155 118 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 GABARAPO95166 117 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 SAA2P0DJI9 122 aaPredicted RBP14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 VSIG10L2P0DP72 767 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 CD1BP29016 333 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 BLCAPP62952 87 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 PNLIPRP3Q17RR3 467 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 ABCA11PQ4W5N1 156 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 C9orf152Q5JTZ5 239 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 GPR107Q5VW38 600 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 ANKRD13BQ86YJ7 626 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 Q8N2B8 174 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 KLHDC1Q8N7A1 406 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 NUDCD2Q8WVJ2 157 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 SLC25A46Q96AG3 418 aa14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 KCTD12Q96CX2 325 aaKnown RBP14.76□□□□□ -0.05
PRPF40B-216ENST00000552301 RAB29O14966 203 aa14.75□□□□□ -0.05
PRPF40B-216ENST00000552301 OR3A3P47888 321 aa14.75□□□□□ -0.05
PRPF40B-216ENST00000552301 SRSF4Q08170 494 aaKnown RBP14.75□□□□□ -0.05
PRPF40B-216ENST00000552301 FBLN7Q53RD9 439 aa14.75□□□□□ -0.05
PRPF40B-216ENST00000552301 UBE2NLQ5JXB2 153 aa14.75□□□□□ -0.05
PRPF40B-216ENST00000552301 FAM71F2Q6NXP2 309 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms