RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 IL20Q9NYY1 176 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 EXOSC1Q9Y3B2 195 aaKnown RBP1.77□□□□□ -2.13
CPSF6-207ENST00000551516 MED31Q9Y3C7 131 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 IER3IP1Q9Y5U9 82 aa1.77□□□□□ -2.13
CPSF6-207ENST00000551516 DNAH5Q8TE73 4624 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 TRAV38-1A0A0B4J264 116 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 IGKV1-9A0A0C4DH69 117 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 IGKV1-12A0A0C4DH73 117 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 A0A1W2PRD5 423 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 A0A1W2PRF3 423 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 A0A1W2PRM7 423 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 DHRS12A0PJE2 317 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 PQLC2LA1A4F0 135 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 ACOD1A6NK06 481 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 FAM220BPB1ANY3 271 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 I3L521 148 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 K7N7A8 449 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 M0R135 149 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 SYNGR1O43759 233 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 EDF1O60869 148 aaKnown RBP1.76□□□□□ -2.13
CPSF6-207ENST00000551516 ENTPD5O75356 428 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 NDUFB2O95178 105 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 NPPAP01160 153 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 IGKV1D-12P01611 117 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 RBP4P02753 201 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 KRT8P05787 483 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 HCKP08631 526 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 PGA5P0DJD9 388 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 CLUP10909 449 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 SLC2A1P11166 492 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 IFI30P13284 250 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 CCL3L1P16619 93 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 ALOX5APP20292 161 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 GSTM3P21266 225 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 SLC2A5P22732 501 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 PPIBP23284 216 aaKnown RBP1.76□□□□□ -2.13
CPSF6-207ENST00000551516 SOX6P35712 828 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 GPR4P46093 362 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 YAP1P46937 504 aaKnown RBP1.76□□□□□ -2.13
CPSF6-207ENST00000551516 MAGOHP61326 146 aaKnown RBP1.76□□□□□ -2.13
CPSF6-207ENST00000551516 SPIBQ01892 262 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF85Q03923 595 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 ST3GAL3Q11203 375 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 ECH1Q13011 328 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 KRR1Q13601 381 aaKnown RBP1.76□□□□□ -2.13
CPSF6-207ENST00000551516 DIAPH2-AS1Q14236 149 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 UBE2V2Q15819 145 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 TATDN3Q17R31 274 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 MICAQ29983 383 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 C17orf58Q2M2W7 97 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 LRRC75BQ2VPJ9 315 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 SLC36A3Q495N2 470 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 METTL11BQ5VVY1 283 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 MEDAGQ5VYS4 303 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 METTL21CQ5VZV1 264 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 LEMD1Q68G75 181 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 SLC25A24Q6NUK1 477 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 SMARCD3Q6STE5 483 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 DRAM2Q6UX65 266 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 GSG1LQ6UXU4 331 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 ADAMTSL5Q6ZMM2 481 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 ACP7Q6ZNF0 438 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 DHDDSQ86SQ9 333 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 OAFQ86UD1 273 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 SLC25A42Q86VD7 318 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 CALHM1Q8IU99 346 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 MICU2Q8IYU8 434 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF491Q8N8L2 437 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 CYB561A3Q8NBI2 242 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 OR5AU1Q8NGC0 362 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 OR4Q3Q8NH05 313 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 RFESDQ8TAC1 157 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 MUC7Q8TAX7 377 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF596Q8TC21 504 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 MYDGFQ969H8 173 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 TOMM40LQ969M1 308 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 MALSU1Q96EH3 234 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF799Q96GE5 643 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 AKR1E2Q96JD6 320 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 C9orf85Q96MD7 179 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 SOSTQ9BQB4 213 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 ZNF649Q9BS31 505 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 SLC22A4Q9H015 551 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 NIPAL2Q9H841 368 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 RMND5AQ9H871 391 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 CCNB1IP1Q9NPC3 277 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 FAM206AQ9NX38 181 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 STX18Q9P2W9 335 aaKnown RBP1.76□□□□□ -2.13
CPSF6-207ENST00000551516 MLXQ9UH92 298 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 RNF24Q9Y225 148 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 ENPP4Q9Y6X5 453 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 COMMD3-BMI1R4GMX3 469 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 U3KQK5 164 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 MYCBP2O75592 4640 aa1.76□□□□□ -2.13
CPSF6-207ENST00000551516 IGHV3OR16-12A0A075B7B8 117 aa1.75□□□□□ -2.13
CPSF6-207ENST00000551516 GMNCA6NCL1 334 aa1.75□□□□□ -2.13
CPSF6-207ENST00000551516 CCDC182A6NF36 153 aa1.75□□□□□ -2.13
CPSF6-207ENST00000551516 TVP23AA6NH52 213 aa1.75□□□□□ -2.13
CPSF6-207ENST00000551516 RFPL4AA6NLU0 287 aa1.75□□□□□ -2.13
CPSF6-207ENST00000551516 LRRC30A6NM36 301 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms