RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 H2AFY2Q9P0M6 372 aaPredicted RBP8.98□□□□□ -0.97
PTCH1-222ENST00000551425 GNG12Q9UBI6 72 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 SLC23A1Q9UHI7 598 aa8.98□□□□□ -0.97
PTCH1-222ENST00000551425 PKHD1P08F94 4074 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 A0A0G2JLM5 398 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 C13orf42A0A1B0GVH6 325 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 ANKRD34BA5PLL1 514 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 ZAR1LA6NP61 321 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 RRHO14718 337 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 OR2A4O95047 310 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 POLR2IP36954 125 aaKnown RBP8.97□□□□□ -0.97
PTCH1-222ENST00000551425 EFNB1P98172 346 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 ZNF691Q5VV52 312 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 ZNF555Q8NEP9 628 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 LFNGQ8NES3 379 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 OR2G2Q8NGZ5 317 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 OR10AC1Q8NH08 325 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 ABHD5Q8WTS1 349 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 NRG4Q8WWG1 115 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 MRPL20Q9BYC9 149 aaKnown RBP8.97□□□□□ -0.97
PTCH1-222ENST00000551425 FBXL15Q9H469 300 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 RAB9BQ9NP90 201 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 ZNF581Q9P0T4 197 aa8.97□□□□□ -0.97
PTCH1-222ENST00000551425 LOC100130705A0A1B0GUX0 176 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 A0A1B0GVY2 172 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 H3BUA1 57 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 FCN1O00602 326 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 SLC16A6O15403 523 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 SPINT2O43291 252 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 MT-ND4P03905 459 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 EPHA2P29317 976 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 PRR20EP86478 221 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 PRR20CP86479 221 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 PRR20DP86480 221 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 PRR20BP86481 221 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 PRR20AP86496 221 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 CD300EQ496F6 205 aaPredicted RBP8.96□□□□□ -0.98
PTCH1-222ENST00000551425 TTC23Q5W5X9 447 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 C12orf73Q69YU5 71 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 ZNF497Q6ZNH5 498 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 LINC00336Q6ZUF6 198 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 LYG2Q86SG7 212 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 DHRSXQ8N5I4 330 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 OR10V1Q8NGI7 309 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 OR51A4Q8NGJ6 313 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 OR13C3Q8NGS6 347 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 CCDC107Q8WV48 283 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 FAM103A1Q9BTL3 118 aaKnown RBP8.96□□□□□ -0.98
PTCH1-222ENST00000551425 GGTLC1Q9BX51 225 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 FRRS1LQ9P0K9 344 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 ADAM30Q9UKF2 790 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 GAB2Q9UQC2 676 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 GMPPBQ9Y5P6 360 aa8.96□□□□□ -0.98
PTCH1-222ENST00000551425 MUC4Q99102 2169 aa8.95□□□□□ -0.98
PTCH1-222ENST00000551425 AIREO43918 545 aa8.95□□□□□ -0.98
PTCH1-222ENST00000551425 DYRK1AQ13627 763 aa8.95□□□□□ -0.98
PTCH1-222ENST00000551425 NHLRC3Q5JS37 347 aa8.95□□□□□ -0.98
PTCH1-222ENST00000551425 FDX2Q6P4F2 183 aa8.95□□□□□ -0.98
PTCH1-222ENST00000551425 ZNF562Q6V9R5 426 aa8.95□□□□□ -0.98
PTCH1-222ENST00000551425 FAM220AQ7Z4H9 259 aa8.95□□□□□ -0.98
PTCH1-222ENST00000551425 GID4Q8IVV7 300 aa8.95□□□□□ -0.98
PTCH1-222ENST00000551425 ODF3L1Q8IXM7 274 aa8.95□□□□□ -0.98
PTCH1-222ENST00000551425 POC5Q8NA72 575 aa8.95□□□□□ -0.98
PTCH1-222ENST00000551425 TMEM163Q8TC26 289 aa8.95□□□□□ -0.98
PTCH1-222ENST00000551425 PHLDA1Q8WV24 401 aaPredicted RBP8.95□□□□□ -0.98
PTCH1-222ENST00000551425 TRUB1Q8WWH5 349 aaKnown RBP8.95□□□□□ -0.98
PTCH1-222ENST00000551425 PEMTQ9UBM1 199 aa8.95□□□□□ -0.98
PTCH1-222ENST00000551425 PEF1Q9UBV8 284 aaKnown RBP8.95□□□□□ -0.98
PTCH1-222ENST00000551425 WARS2Q9UGM6 360 aaKnown RBP8.95□□□□□ -0.98
PTCH1-222ENST00000551425 GNG8Q9UK08 70 aa8.95□□□□□ -0.98
PTCH1-222ENST00000551425 TP53TG1Q9Y2A0 90 aa8.95□□□□□ -0.98
PTCH1-222ENST00000551425 VPS13DQ5THJ4 4388 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 MSGN1A6NI15 193 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 M0R129 80 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 AIPO00170 330 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 SULT1B1O43704 296 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 OR7C1O76099 320 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-222ENST00000551425 HBZP02008 142 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 HSPA13P48723 471 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 ALKBH1Q13686 389 aaKnown RBP8.94□□□□□ -0.98
PTCH1-222ENST00000551425 PLGLAQ15195 96 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 RSU1Q15404 277 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 MORN2Q502X0 79 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 ZNF343Q6P1L6 599 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 ASCL4Q6XD76 172 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 ZNF833PQ6ZTB9 187 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 TCEANCQ8N8B7 351 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 OR10H4Q8NGA5 316 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 OR8J1Q8NGP2 316 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 OR10K1Q8NGX5 313 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 CYGBQ8WWM9 190 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 CPNE2Q96FN4 548 aaPredicted RBP8.94□□□□□ -0.98
PTCH1-222ENST00000551425 ZC4H2Q9NQZ6 224 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 IMPAD1Q9NX62 359 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 ST3GAL6Q9Y274 331 aa8.94□□□□□ -0.98
PTCH1-222ENST00000551425 LOC102724200A0A096LPH7 203 aaPredicted RBP8.93□□□□□ -0.98
PTCH1-222ENST00000551425 GABRPO00591 440 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 TRBV12-3P01733 135 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 AADACP22760 399 aa8.93□□□□□ -0.98
PTCH1-222ENST00000551425 BMI1P35226 326 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms