RNA–Protein interactions for RNA: ENST00000551305.5

TMEM106C-216, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best)

Gene TMEM106C, Length 1,356 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-216ENST00000551305 LALBAP00709 142 aa11.42□□□□□ -0.58
TMEM106C-216ENST00000551305 CHRNA7P36544 502 aa11.42□□□□□ -0.58
TMEM106C-216ENST00000551305 GPR176Q14439 515 aa11.42□□□□□ -0.58
TMEM106C-216ENST00000551305 TMEM30BQ3MIR4 351 aa11.42□□□□□ -0.58
TMEM106C-216ENST00000551305 SIGIRRQ6IA17 410 aa11.42□□□□□ -0.58
TMEM106C-216ENST00000551305 ACSM6Q6P461 480 aa11.42□□□□□ -0.58
TMEM106C-216ENST00000551305 JAGN1Q8N5M9 183 aa11.42□□□□□ -0.58
TMEM106C-216ENST00000551305 ZFP41Q8N8Y5 198 aa11.42□□□□□ -0.58
TMEM106C-216ENST00000551305 CITED4Q96RK1 184 aa11.42□□□□□ -0.58
TMEM106C-216ENST00000551305 SELENOIQ9C0D9 397 aa11.42□□□□□ -0.58
TMEM106C-216ENST00000551305 RAB9BQ9NP90 201 aa11.42□□□□□ -0.58
TMEM106C-216ENST00000551305 IGHV3-11P01762 117 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 RPS11P62280 158 aaKnown RBP eCLIP11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 C19orf54Q5BKX5 351 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 NPBQ8NG41 125 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 GHSRQ92847 366 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 SMIM19Q96E16 107 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 MBNL3Q9NUK0 354 aaKnown RBP11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 BABAM2Q9NXR7 383 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 CLEC2DQ9UHP7 191 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 A3GALT2U3KPV4 340 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 SAA2-SAA4A0A096LPE2 208 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 FCN1O00602 326 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 WBP4O75554 376 aaKnown RBP11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 GPX5O75715 221 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 SC5DO75845 299 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 LGALS1P09382 135 aaKnown RBP11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 SAA2P0DJI9 122 aaPredicted RBP11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 EGR2P11161 476 aaPredicted RBP11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 SNRPBP14678 240 aaKnown RBP11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 LRRC36Q1X8D7 754 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 AWAT2Q6E213 333 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 TRAT1Q6PIZ9 186 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 TMPRSS11AQ6ZMR5 421 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 ZNF833PQ6ZTB9 187 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 OR6Q1Q8NGQ2 317 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 MRPL30Q8TCC3 161 aaKnown RBP11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 MRPS24Q96EL2 167 aaKnown RBP11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 GHITMQ9H3K2 345 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 FBXL15Q9H469 300 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 KCNIP1Q9NZI2 227 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 KIAA1456Q9P272 454 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 JPT1Q9UK76 154 aa11.41□□□□□ -0.58
TMEM106C-216ENST00000551305 YPEL1O60688 119 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 CRTAPO75718 401 aaPredicted RBP11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 NDUFA3O95167 84 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 BAG2O95816 211 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 MAS1P04201 325 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 MGMTP16455 207 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 FUT3P21217 361 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 CX3CL1P78423 397 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 Q499Y3 187 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 DMKNQ6E0U4 476 aaPredicted RBP11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 ADAMTSL5Q6ZMM2 481 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 Q8N1Y9 231 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 RDH12Q96NR8 316 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 MS4A10Q96PG2 267 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 YPEL2Q96QA6 119 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 TM2D3Q9BRN9 247 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 FAM103A1Q9BTL3 118 aaKnown RBP11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 CKLFQ9UBR5 152 aa11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 FOXA2Q9Y261 457 aaPredicted RBP11.4□□□□□ -0.59
TMEM106C-216ENST00000551305 STARD9Q9P2P6 4700 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 TRBV5-7A0A0A0MS05 114 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 OR8U9P0C7N5 309 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 IGHV4-30-4P0DP06 118 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 DCKP27707 260 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 HTD2P86397 168 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 ZNF660Q6AZW8 331 aaPredicted RBP11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 FAM131AQ6UXB0 335 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 GLDNQ6ZMI3 551 aaPredicted RBP11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 ABHD5Q8WTS1 349 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 FAM46BQ96A09 425 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 PGLYRP3Q96LB9 341 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 Q96M66 194 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 OR14A2Q96R54 314 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 OR4C12Q96R67 309 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 C9orf16Q9BUW7 83 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 CST11Q9H112 138 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 IFI27L2Q9H2X8 130 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 EDA2RQ9HAV5 297 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 CHCHD3Q9NX63 227 aaKnown RBP11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 FAM53CQ9NYF3 392 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 GAB2Q9UQC2 676 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 ERGIC3Q9Y282 383 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 NUBP2Q9Y5Y2 271 aa11.39□□□□□ -0.59
TMEM106C-216ENST00000551305 LYSTQ99698 3801 aa11.38□□□□□ -0.59
TMEM106C-216ENST00000551305 PNMA8CA0A1B0GUJ8 204 aa11.38□□□□□ -0.59
TMEM106C-216ENST00000551305 RRHO14718 337 aa11.38□□□□□ -0.59
TMEM106C-216ENST00000551305 LDLRAD4O15165 306 aa11.38□□□□□ -0.59
TMEM106C-216ENST00000551305 ST8SIA5O15466 376 aa11.38□□□□□ -0.59
TMEM106C-216ENST00000551305 CA11O75493 328 aa11.38□□□□□ -0.59
TMEM106C-216ENST00000551305 HSPB1P04792 205 aaKnown RBP11.38□□□□□ -0.59
TMEM106C-216ENST00000551305 CRIP2P52943 208 aaPredicted RBP11.38□□□□□ -0.59
TMEM106C-216ENST00000551305 PITPNAQ00169 270 aa11.38□□□□□ -0.59
TMEM106C-216ENST00000551305 RPL39P5Q59GN2 51 aa11.38□□□□□ -0.59
TMEM106C-216ENST00000551305 YIF1BQ5BJH7 314 aa11.38□□□□□ -0.59
TMEM106C-216ENST00000551305 LYPD6Q86Y78 171 aa11.38□□□□□ -0.59
TMEM106C-216ENST00000551305 CLCC1Q96S66 551 aa11.38□□□□□ -0.59
TMEM106C-216ENST00000551305 FAM90A7PA6NKC0 464 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms