RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 RBMXL1Q96E39 390 aaKnown RBP17.49■□□□□ 0.39
PRDM4-205ENST00000550376 COL12A1Q99715 3063 aa17.48■□□□□ 0.39
PRDM4-205ENST00000550376 IFNL4K9M1U5 179 aa17.48■□□□□ 0.39
PRDM4-205ENST00000550376 RBPJQ06330 500 aa17.48■□□□□ 0.39
PRDM4-205ENST00000550376 SLC25A32Q9H2D1 315 aa17.48■□□□□ 0.39
PRDM4-205ENST00000550376 WFDC1Q9HC57 220 aa17.48■□□□□ 0.39
PRDM4-205ENST00000550376 FAM24AA6NFZ4 105 aa17.48■□□□□ 0.39
PRDM4-205ENST00000550376 TUBAL3A6NHL2 446 aa17.48■□□□□ 0.39
PRDM4-205ENST00000550376 E5RGE8 158 aa17.48■□□□□ 0.39
PRDM4-205ENST00000550376 LHBP01229 141 aa17.48■□□□□ 0.39
PRDM4-205ENST00000550376 NKX2-1P43699 371 aaPredicted RBP17.48■□□□□ 0.39
PRDM4-205ENST00000550376 RPS23P62266 143 aaKnown RBP17.48■□□□□ 0.39
PRDM4-205ENST00000550376 OR5D13Q8NGL4 314 aa17.48■□□□□ 0.39
PRDM4-205ENST00000550376 PFDN2Q9UHV9 154 aa17.48■□□□□ 0.39
PRDM4-205ENST00000550376 NSG2Q9Y328 171 aa17.48■□□□□ 0.39
PRDM4-205ENST00000550376 RAMP3O60896 148 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 VDAC1P21796 283 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 PTAFRP25105 342 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 SRPXP78539 464 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 ZNF585BQ52M93 769 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 STOML3Q8TAV4 291 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 GPR146Q96CH1 333 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 LINC00052Q96N35 136 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 BARX1Q9HBU1 254 aaPredicted RBP17.47■□□□□ 0.39
PRDM4-205ENST00000550376 FAM90A27PA6NNH2 459 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 ST8SIA5O15466 376 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 TMEM50AO95807 157 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 S100GP29377 79 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 CAV2P51636 162 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 RPL30P62888 115 aaKnown RBP17.47■□□□□ 0.39
PRDM4-205ENST00000550376 CDSNQ15517 529 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 RNASE11Q8TAA1 199 aaKnown RBP17.47■□□□□ 0.39
PRDM4-205ENST00000550376 LINC01560Q8TB33 94 aa17.47■□□□□ 0.39
PRDM4-205ENST00000550376 ANKHD1Q8IWZ3 2542 aaKnown RBP17.47■□□□□ 0.39
PRDM4-205ENST00000550376 FAM90A1Q86YD7 464 aa17.46■□□□□ 0.39
PRDM4-205ENST00000550376 LEAP2Q969E1 77 aa17.46■□□□□ 0.39
PRDM4-205ENST00000550376 POMT1Q9Y6A1 747 aa17.46■□□□□ 0.39
PRDM4-205ENST00000550376 SPTBN1Q01082 2364 aaKnown RBP17.46■□□□□ 0.39
PRDM4-205ENST00000550376 GYPAP02724 150 aa17.46■□□□□ 0.39
PRDM4-205ENST00000550376 OR1S2Q8NGQ3 325 aa17.46■□□□□ 0.39
PRDM4-205ENST00000550376 NINJ1Q92982 152 aa17.46■□□□□ 0.39
PRDM4-205ENST00000550376 CCL13Q99616 98 aa17.46■□□□□ 0.39
PRDM4-205ENST00000550376 PLA2G2EQ9NZK7 142 aa17.46■□□□□ 0.39
PRDM4-205ENST00000550376 RFNGQ9Y644 331 aa17.46■□□□□ 0.39
PRDM4-205ENST00000550376 LY6DQ14210 128 aa17.45■□□□□ 0.38
PRDM4-205ENST00000550376 PHYHIPLQ96FC7 376 aa17.45■□□□□ 0.38
PRDM4-205ENST00000550376 VKORC1Q9BQB6 163 aa17.45■□□□□ 0.38
PRDM4-205ENST00000550376 PSG11Q9UQ72 335 aa17.45■□□□□ 0.38
PRDM4-205ENST00000550376 ODAMA1E959 279 aa17.45■□□□□ 0.38
PRDM4-205ENST00000550376 C15orf65H3BRN8 121 aa17.45■□□□□ 0.38
PRDM4-205ENST00000550376 UCNP55089 124 aa17.45■□□□□ 0.38
PRDM4-205ENST00000550376 NUP37Q8NFH4 326 aa17.45■□□□□ 0.38
PRDM4-205ENST00000550376 RNF7Q9UBF6 113 aa17.45■□□□□ 0.38
PRDM4-205ENST00000550376 DYSFO75923 2080 aa17.45■□□□□ 0.38
PRDM4-205ENST00000550376 H3BP45 60 aa17.44■□□□□ 0.38
PRDM4-205ENST00000550376 DLL1O00548 723 aa17.44■□□□□ 0.38
PRDM4-205ENST00000550376 IGKV1-5P01602 117 aa17.44■□□□□ 0.38
PRDM4-205ENST00000550376 CFHR2P36980 270 aa17.44■□□□□ 0.38
PRDM4-205ENST00000550376 AKR1C2P52895 323 aa17.44■□□□□ 0.38
PRDM4-205ENST00000550376 AKR1C1Q04828 323 aa17.44■□□□□ 0.38
PRDM4-205ENST00000550376 OR10Z1Q8NGY1 313 aa17.44■□□□□ 0.38
PRDM4-205ENST00000550376 IL19Q9UHD0 177 aa17.44■□□□□ 0.38
PRDM4-205ENST00000550376 CCL21O00585 134 aa17.44■□□□□ 0.38
PRDM4-205ENST00000550376 CHST1O43916 411 aa17.44■□□□□ 0.38
PRDM4-205ENST00000550376 ZNF816Q0VGE8 651 aaPredicted RBP17.44■□□□□ 0.38
PRDM4-205ENST00000550376 STPG2Q8N412 459 aa17.44■□□□□ 0.38
PRDM4-205ENST00000550376 FAM216BQ8N7L0 139 aa17.44■□□□□ 0.38
PRDM4-205ENST00000550376 FAM157CP0CG43 387 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 CLINT1Q14677 625 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 PLEKHA2Q9HB19 425 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 TAS2R3Q9NYW6 316 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 COQ3Q9NZJ6 369 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 CACNG5Q9UF02 275 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 A0A1W2PPE3 182 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 IGSF23A1L1A6 192 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 K7N7A8 449 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 CST7O76096 145 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 PLAUP00749 431 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 ID4P47928 161 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 ERVFRD-1P60508 538 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 TMEM217Q8N7C4 229 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 SNX22Q96L94 193 aa17.43■□□□□ 0.38
PRDM4-205ENST00000550376 MED19A0JLT2 244 aaPredicted RBP17.42■□□□□ 0.38
PRDM4-205ENST00000550376 ARHGDIBP52566 201 aa17.42■□□□□ 0.38
PRDM4-205ENST00000550376 ZNF645Q8N7E2 425 aa17.42■□□□□ 0.38
PRDM4-205ENST00000550376 AKR1E2Q96JD6 320 aa17.42■□□□□ 0.38
PRDM4-205ENST00000550376 LURAP1Q96LR2 239 aa17.42■□□□□ 0.38
PRDM4-205ENST00000550376 GNG12Q9UBI6 72 aa17.42■□□□□ 0.38
PRDM4-205ENST00000550376 KRASP01116 189 aa17.42■□□□□ 0.38
PRDM4-205ENST00000550376 BRWD1-AS2P59051 145 aa17.42■□□□□ 0.38
PRDM4-205ENST00000550376 PLEKHF2Q9H8W4 249 aa17.42■□□□□ 0.38
PRDM4-205ENST00000550376 PKD1L2Q7Z442 2459 aa17.42■□□□□ 0.38
PRDM4-205ENST00000550376 C17orf98A8MV24 154 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 ZNF705EA8MWA4 302 aaPredicted RBP17.41■□□□□ 0.38
PRDM4-205ENST00000550376 MGST3O14880 152 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 SPINT2O43291 252 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 GPR137BO60478 399 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 LPAR6P43657 344 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 GATA4P43694 442 aa17.41■□□□□ 0.38
PRDM4-205ENST00000550376 P2RY1P47900 373 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms