RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 SYT6Q5T7P8 510 aaPredicted RBP5.94□□□□□ -1.46
NEK3-201ENST00000550331 OR2G6Q5TZ20 316 aa5.94□□□□□ -1.46
NEK3-201ENST00000550331 DMKNQ6E0U4 476 aaPredicted RBP5.94□□□□□ -1.46
NEK3-201ENST00000550331 RAB12Q6IQ22 244 aa5.94□□□□□ -1.46
NEK3-201ENST00000550331 FAM53AQ6NSI3 398 aaPredicted RBP5.94□□□□□ -1.46
NEK3-201ENST00000550331 CDH26Q8IXH8 852 aa5.94□□□□□ -1.46
NEK3-201ENST00000550331 PQLC1Q8N2U9 271 aa5.94□□□□□ -1.46
NEK3-201ENST00000550331 OR11H1Q8NG94 326 aa5.94□□□□□ -1.46
NEK3-201ENST00000550331 CT45A3Q8NHU0 189 aa5.94□□□□□ -1.46
NEK3-201ENST00000550331 GHSRQ92847 366 aa5.94□□□□□ -1.46
NEK3-201ENST00000550331 UBE2E2Q96LR5 201 aa5.94□□□□□ -1.46
NEK3-201ENST00000550331 RDH12Q96NR8 316 aa5.94□□□□□ -1.46
NEK3-201ENST00000550331 PRR25Q96S07 402 aa5.94□□□□□ -1.46
NEK3-201ENST00000550331 SLC29A1Q99808 456 aa5.94□□□□□ -1.46
NEK3-201ENST00000550331 ETAA1Q9NY74 926 aa5.94□□□□□ -1.46
NEK3-201ENST00000550331 DIMT1Q9UNQ2 313 aaKnown RBP5.94□□□□□ -1.46
NEK3-201ENST00000550331 ZNF256Q9Y2P7 627 aaPredicted RBP5.94□□□□□ -1.46
NEK3-201ENST00000550331 MRPS28Q9Y2Q9 187 aaKnown RBP5.94□□□□□ -1.46
NEK3-201ENST00000550331 EXOSC1Q9Y3B2 195 aaKnown RBP5.94□□□□□ -1.46
NEK3-201ENST00000550331 TRAV8-7A0A075B6U6 113 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 LCE6AA0A183 80 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 MAGEA13PA6NCF6 341 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 LALBAP00709 142 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 HLA-DRB1P01911 266 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 PPIFP30405 207 aaKnown RBP5.93□□□□□ -1.46
NEK3-201ENST00000550331 RPS11P62280 158 aaKnown RBP eCLIP5.93□□□□□ -1.46
NEK3-201ENST00000550331 ZNF616Q08AN1 781 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 MED21Q13503 144 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 MMDQ15546 238 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 SMN1Q16637 294 aaKnown RBP5.93□□□□□ -1.46
NEK3-201ENST00000550331 ZNF260Q3ZCT1 412 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 MORN2Q502X0 79 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 LY6G6FQ5SQ64 297 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 AWAT2Q6E213 333 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 GLIPR1L1Q6UWM5 242 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 PRR18Q8N4B5 295 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 ZNF555Q8NEP9 628 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 OR10V1Q8NGI7 309 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 OR13C5Q8NGS8 318 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 OR4K15Q8NH41 348 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 OR1L1Q8NH94 360 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 MUC7Q8TAX7 377 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 MUL1Q969V5 352 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 ORAI1Q96D31 301 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 PGLYRP3Q96LB9 341 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 ABHD14AQ9BUJ0 271 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 OR51J1Q9H342 316 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 TAF9BQ9HBM6 251 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 OR2S2Q9NQN1 319 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 SMPD3Q9NY59 655 aaPredicted RBP5.93□□□□□ -1.46
NEK3-201ENST00000550331 JPT1Q9UK76 154 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 VSIG4Q9Y279 399 aa5.93□□□□□ -1.46
NEK3-201ENST00000550331 TRBV5-7A0A0A0MS05 114 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 I3L521 148 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 SLC2A2P11168 524 aaPredicted RBP5.92□□□□□ -1.46
NEK3-201ENST00000550331 MGMTP16455 207 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 RCC1P18754 421 aaPredicted RBP5.92□□□□□ -1.46
NEK3-201ENST00000550331 FUT3P21217 361 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 MYF6P23409 242 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 TAS2R43P59537 309 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 ACTBP60709 375 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 ADARB1P78563 741 aaKnown RBP5.92□□□□□ -1.46
NEK3-201ENST00000550331 HTD2P86397 168 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 KIAA0141Q14154 515 aaPredicted RBP5.92□□□□□ -1.46
NEK3-201ENST00000550331 ASPHD1Q5U4P2 390 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 FAM71F2Q6NXP2 309 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 TMEM65Q6PI78 240 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 ZNF833PQ6ZTB9 187 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 LYPD6Q86Y78 171 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 ODF3L1Q8IXM7 274 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 JAGN1Q8N5M9 183 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 NKAIN3Q8N8D7 197 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 ZNF491Q8N8L2 437 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 ZNF485Q8NCK3 441 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 NPBQ8NG41 125 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 OR1N2Q8NGR9 330 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 THRSPQ92748 146 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 TMEM80Q96HE8 168 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 Q96M66 194 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 OR14A2Q96R54 314 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 NABP2Q9BQ15 211 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 ZNF251Q9BRH9 671 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 UQCC2Q9BRT2 126 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 SELENOIQ9C0D9 397 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 KLK15Q9H2R5 256 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 GNB4Q9HAV0 340 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 S100A14Q9HCY8 104 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 KCNIP1Q9NZI2 227 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 GHRLQ9UBU3 117 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 CLEC2DQ9UHP7 191 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 LRRC42Q9Y546 428 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 PEX16Q9Y5Y5 336 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 SMAD5-AS1Q9Y6J3 95 aa5.92□□□□□ -1.46
NEK3-201ENST00000550331 PLECQ15149 4684 aaKnown RBP5.92□□□□□ -1.46
NEK3-201ENST00000550331 IGHV7-81A0A0B4J1V7 117 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 TRAV41A0A0B4J266 112 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 G3V318 75 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 ATP6V0E1O15342 81 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 NBR2O15453 112 aa5.91□□□□□ -1.46
NEK3-201ENST00000550331 YPEL1O60688 119 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms