RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 TM2D1Q9BX74 207 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 PLEKHJ1Q9NW61 149 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 PIPOXQ9P0Z9 390 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 LINC00527Q9UJ94 153 aa8.56□□□□□ -1.04
VTI1BP3-201ENST00000550220 LINC01548A6NM66 108 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 ZNF736B4DX44 427 aaPredicted RBP8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 SLC22A1O15245 554 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 RAMP3O60896 148 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 ARL6IP5O75915 188 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 IGHG4P01861 327 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 UCHL1P09936 223 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 VSIG8P0DPA2 414 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 CHATP28329 748 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 F2RL1P55085 397 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 MMDQ15546 238 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 TMEM65Q6PI78 240 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 ETV3LQ6ZN32 361 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 LRRTM1Q86UE6 522 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 OR52L2PQ8NGH6 319 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 OR5M8Q8NGP6 311 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 ISYNA1Q9NPH2 558 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 KIAA1456Q9P272 454 aa8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 ZNF107Q9UII5 783 aaPredicted RBP8.55□□□□□ -1.04
VTI1BP3-201ENST00000550220 TRBV6-6A0A0A6YYG2 114 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 K7EIL1 84 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 ITGB1BP1O14713 200 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 RAB29O14966 203 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 RPLP1P05386 114 aaKnown RBP8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 ARSBP15848 533 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 BLVRBP30043 206 aaPredicted RBP8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 MC5RP33032 325 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 KRTAP10-11P60412 298 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 ACTBP60709 375 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 DGCR2P98153 550 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 TPBGQ13641 420 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 HMGN3Q15651 99 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 LIN54Q6MZP7 749 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 FAM53AQ6NSI3 398 aaPredicted RBP8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 ZNF833PQ6ZTB9 187 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 NPBQ8NG41 125 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 EDARADDQ8WWZ3 215 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 KCTD7Q96MP8 289 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 RNF5Q99942 180 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 SULT4A1Q9BR01 284 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 FAAP24Q9BTP7 215 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 VCX3BQ9H321 246 aa8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 CHMP1AQ9HD42 196 aaPredicted RBP8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 LSM2Q9Y333 95 aaKnown RBP8.54□□□□□ -1.04
VTI1BP3-201ENST00000550220 DNAH3Q8TD57 4116 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 TMEM14DPA8MWL7 114 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 NBR2O15453 112 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 RGS10O43665 173 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 RBBP9O75884 186 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 NAPSAO96009 420 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 HLA-DRB1P01911 266 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 ZBTB25P24278 435 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 PSMB8P28062 276 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 PPP1CCP36873 323 aaKnown RBP8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 CFHR3Q02985 330 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 INSL4Q14641 139 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 IRF3Q14653 427 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 VAX1Q5SQQ9 334 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 C9orf66Q5T8R8 295 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 LCNL1Q6ZST4 164 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 C6orf201Q7Z4U5 140 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 ODF3L1Q8IXM7 274 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 C4orf3Q8WVX3 66 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 IL1F10Q8WWZ1 152 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 RAX2Q96IS3 184 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 UBE2E2Q96LR5 201 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 NABP2Q9BQ15 211 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 OR51J1Q9H342 316 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 DUSP21Q9H596 190 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 PLGRKTQ9HBL7 147 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 ACOT13Q9NPJ3 140 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 SLC23A1Q9UHI7 598 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 HSF4Q9ULV5 492 aa8.53□□□□□ -1.04
VTI1BP3-201ENST00000550220 SAA2-SAA4A0A096LPE2 208 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 OR5H14A6NHG9 310 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 SLC17A2O00624 439 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 HSMCR30P0CW71 290 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 SAA2P0DJI9 122 aaPredicted RBP8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 MYF6P23409 242 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 HOXD3P31249 432 aaPredicted RBP8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 INSL3P51460 131 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 RAB25P57735 213 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 QRFPP83859 136 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 TMEM267Q0VDI3 215 aaPredicted RBP8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 MLLT11Q13015 90 aaPredicted RBP8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 UNC119Q13432 240 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 C5orf64Q2M2E5 130 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 FAM27D1Q5T7N8 215 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 LIPKQ5VXJ0 399 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 ZNF660Q6AZW8 331 aaPredicted RBP8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 OR10K2Q6IF99 312 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 ZNF880Q6PDB4 577 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 C18orf65Q6ZTR6 163 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 PRSS48Q7RTY5 328 aa8.52□□□□□ -1.05
VTI1BP3-201ENST00000550220 SVOPQ8N4V2 548 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms