RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 RPS11P62280 158 aaKnown RBP eCLIP11.91□□□□□ -0.5
RAB5C-205ENST00000550013 ECSCRQ19T08 205 aa11.91□□□□□ -0.5
RAB5C-205ENST00000550013 SIGIRRQ6IA17 410 aa11.91□□□□□ -0.5
RAB5C-205ENST00000550013 ZFP41Q8N8Y5 198 aa11.91□□□□□ -0.5
RAB5C-205ENST00000550013 SELENOIQ9C0D9 397 aa11.91□□□□□ -0.5
RAB5C-205ENST00000550013 MBNL3Q9NUK0 354 aaKnown RBP11.91□□□□□ -0.5
RAB5C-205ENST00000550013 BABAM2Q9NXR7 383 aa11.91□□□□□ -0.5
RAB5C-205ENST00000550013 CLEC2DQ9UHP7 191 aa11.91□□□□□ -0.5
RAB5C-205ENST00000550013 IGHV4OR15-8A0A075B7B6 117 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 A0A087WW49 117 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 MGMTP16455 207 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 Q499Y3 187 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 C19orf54Q5BKX5 351 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 DMKNQ6E0U4 476 aaPredicted RBP11.9□□□□□ -0.5
RAB5C-205ENST00000550013 AWAT2Q6E213 333 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 LIN54Q6MZP7 749 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 ZFP1Q6P2D0 407 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 ZNF833PQ6ZTB9 187 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 NPBQ8NG41 125 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 MRPL30Q8TCC3 161 aaKnown RBP11.9□□□□□ -0.5
RAB5C-205ENST00000550013 ARPC1AQ92747 370 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 MRPS24Q96EL2 167 aaKnown RBP11.9□□□□□ -0.5
RAB5C-205ENST00000550013 RDH12Q96NR8 316 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 C9orf16Q9BUW7 83 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 TOLLIPQ9H0E2 274 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 CKLFQ9UBR5 152 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 BIRC6Q9NR09 4857 aa11.9□□□□□ -0.5
RAB5C-205ENST00000550013 SAA2-SAA4A0A096LPE2 208 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 TRBV5-7A0A0A0MS05 114 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 A0A1W2PN81 502 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 LINC01619G3V211 115 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 CA11O75493 328 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 CRTAPO75718 401 aaPredicted RBP11.89□□□□□ -0.51
RAB5C-205ENST00000550013 NDUFA3O95167 84 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 MAS1P04201 325 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 SAA2P0DJI9 122 aaPredicted RBP11.89□□□□□ -0.51
RAB5C-205ENST00000550013 FSTP19883 344 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 FUT3P21217 361 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 DCKP27707 260 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 CHRNA7P36544 502 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 ZFAND6Q6FIF0 208 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 ACSM6Q6P461 480 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 PGLYRP3Q96LB9 341 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 Q96M66 194 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 OR14A2Q96R54 314 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 PALMDQ9NP74 551 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 TPSG1Q9NRR2 321 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 KCNIP1Q9NZI2 227 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 JPT1Q9UK76 154 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 A3GALT2U3KPV4 340 aa11.89□□□□□ -0.51
RAB5C-205ENST00000550013 FAM90A7PA6NKC0 464 aa11.88□□□□□ -0.51
RAB5C-205ENST00000550013 FAM90A23PA8MXZ1 464 aa11.88□□□□□ -0.51
RAB5C-205ENST00000550013 LGALS1P09382 135 aaKnown RBP11.88□□□□□ -0.51
RAB5C-205ENST00000550013 SRSF7Q16629 238 aaKnown RBP eCLIP11.88□□□□□ -0.51
RAB5C-205ENST00000550013 LRRC36Q1X8D7 754 aa11.88□□□□□ -0.51
RAB5C-205ENST00000550013 YIF1BQ5BJH7 314 aa11.88□□□□□ -0.51
RAB5C-205ENST00000550013 FAM131AQ6UXB0 335 aa11.88□□□□□ -0.51
RAB5C-205ENST00000550013 HAPLN4Q86UW8 402 aa11.88□□□□□ -0.51
RAB5C-205ENST00000550013 LYPD6Q86Y78 171 aa11.88□□□□□ -0.51
RAB5C-205ENST00000550013 OR6Q1Q8NGQ2 317 aa11.88□□□□□ -0.51
RAB5C-205ENST00000550013 CST11Q9H112 138 aa11.88□□□□□ -0.51
RAB5C-205ENST00000550013 FBXL15Q9H469 300 aa11.88□□□□□ -0.51
RAB5C-205ENST00000550013 ZMAT4Q9H898 229 aa11.88□□□□□ -0.51
RAB5C-205ENST00000550013 KIAA1456Q9P272 454 aa11.88□□□□□ -0.51
RAB5C-205ENST00000550013 DIMT1Q9UNQ2 313 aaKnown RBP11.88□□□□□ -0.51
RAB5C-205ENST00000550013 FOXA2Q9Y261 457 aaPredicted RBP11.88□□□□□ -0.51
RAB5C-205ENST00000550013 LCE6AA0A183 80 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 PNMA8CA0A1B0GUJ8 204 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 FCN1O00602 326 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 YPEL1O60688 119 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 PDCD6O75340 191 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 BAG2O95816 211 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 IGHV3-11P01762 117 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 GLAP06280 429 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 EGR2P11161 476 aaPredicted RBP11.87□□□□□ -0.51
RAB5C-205ENST00000550013 MYL12AP19105 171 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 CRIP2P52943 208 aaPredicted RBP11.87□□□□□ -0.51
RAB5C-205ENST00000550013 CX3CL1P78423 397 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 HTD2P86397 168 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 C6orf141Q5SZD1 244 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 ZNF554Q86TJ5 538 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 FAM46BQ96A09 425 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 YPEL2Q96QA6 119 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 CITED4Q96RK1 184 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 IFI27L2Q9H2X8 130 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 CHCHD3Q9NX63 227 aaKnown RBP11.87□□□□□ -0.51
RAB5C-205ENST00000550013 GAB2Q9UQC2 676 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 ERGIC3Q9Y282 383 aa11.87□□□□□ -0.51
RAB5C-205ENST00000550013 EXOSC1Q9Y3B2 195 aaKnown RBP11.87□□□□□ -0.51
RAB5C-205ENST00000550013 ST8SIA5O15466 376 aa11.86□□□□□ -0.51
RAB5C-205ENST00000550013 SNRPBP14678 240 aaKnown RBP11.86□□□□□ -0.51
RAB5C-205ENST00000550013 PITPNAQ00169 270 aa11.86□□□□□ -0.51
RAB5C-205ENST00000550013 LY6G6FQ5SQ64 297 aa11.86□□□□□ -0.51
RAB5C-205ENST00000550013 ZNF660Q6AZW8 331 aaPredicted RBP11.86□□□□□ -0.51
RAB5C-205ENST00000550013 GLDNQ6ZMI3 551 aaPredicted RBP11.86□□□□□ -0.51
RAB5C-205ENST00000550013 ZNF485Q8NCK3 441 aa11.86□□□□□ -0.51
RAB5C-205ENST00000550013 OR2AK2Q8NG84 335 aa11.86□□□□□ -0.51
RAB5C-205ENST00000550013 ABHD5Q8WTS1 349 aa11.86□□□□□ -0.51
RAB5C-205ENST00000550013 DERL3Q96Q80 235 aa11.86□□□□□ -0.51
RAB5C-205ENST00000550013 GHITMQ9H3K2 345 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms