RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 C16orf97H3BN30 126 aa12.84□□□□□ -0.35
CUX1-214ENST00000550008 IL24Q13007 206 aa12.84□□□□□ -0.35
CUX1-214ENST00000550008 ZNF385CQ66K41 422 aaPredicted RBP12.84□□□□□ -0.35
CUX1-214ENST00000550008 AURKAIP1Q9NWT8 199 aaPredicted RBP12.84□□□□□ -0.35
CUX1-214ENST00000550008 CBY1Q9Y3M2 126 aa12.84□□□□□ -0.35
CUX1-214ENST00000550008 DEDDO75618 318 aa12.84□□□□□ -0.35
CUX1-214ENST00000550008 WIPI2Q9Y4P8 454 aa12.84□□□□□ -0.35
CUX1-214ENST00000550008 PCDH15Q96QU1 1955 aa12.84□□□□□ -0.35
CUX1-214ENST00000550008 PPIHO43447 177 aaKnown RBP12.83□□□□□ -0.35
CUX1-214ENST00000550008 RNF7Q9UBF6 113 aa12.83□□□□□ -0.35
CUX1-214ENST00000550008 TECTAO75443 2155 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 RBFOX3A6NFN3 312 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 FAM74A7A6NL05 159 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 PGLYRP1O75594 196 aaPredicted RBP12.83□□□□□ -0.36
CUX1-214ENST00000550008 HKR1P10072 659 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 SNRPEP62304 92 aaKnown RBP12.83□□□□□ -0.36
CUX1-214ENST00000550008 FAM74A3Q4VXF1 159 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 PRR27Q6MZM9 219 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 STPG2Q8N412 459 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 OR10G4Q8NGN3 311 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 OR10G9Q8NGN4 311 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 OR10G7Q8NGN6 311 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 OR13D1Q8NGV5 346 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 POM121L2Q96KW2 1035 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 SH3BGRL3Q9H299 93 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 KCNIP2Q9NS61 270 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 ZNF581Q9P0T4 197 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 TRAV14DV4A0A0A6YYC5 116 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 GZMHP20718 246 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 HFEQ30201 348 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 GGNQ86UU5 652 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 LILRB1Q8NHL6 650 aaPredicted RBP12.83□□□□□ -0.36
CUX1-214ENST00000550008 RTBDNQ9BSG5 229 aaPredicted RBP12.83□□□□□ -0.36
CUX1-214ENST00000550008 Q9N2K0 584 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 SLC35D1Q9NTN3 355 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 ONECUT1Q9UBC0 465 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 hADV38S2A0JD32 116 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 DVL1O14640 695 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 GYPAP02724 150 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 SSTR5P35346 364 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 ATP5SQ99766 215 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 USB1Q9BQ65 265 aaKnown RBP12.83□□□□□ -0.36
CUX1-214ENST00000550008 RSRP1Q9BUV0 290 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 SEMA5BQ9P283 1151 aa12.83□□□□□ -0.36
CUX1-214ENST00000550008 FREM1Q5H8C1 2179 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 A0A1W2PPH5 198 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 LOC390937A0A1W2PQ73 354 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 FAM157AC9JC47 383 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 SPINK4O60575 86 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 HRASP01112 189 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 C21orf62-AS1Q17RA5 79 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 LY6G6FQ5SQ64 297 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 ATRXP46100 2492 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 RAB13P51153 203 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 SUB1P53999 127 aaKnown RBP eCLIP12.82□□□□□ -0.36
CUX1-214ENST00000550008 DCTN5Q9BTE1 182 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 REPIN1Q9BWE0 567 aaKnown RBP12.82□□□□□ -0.36
CUX1-214ENST00000550008 BTBD17A6NE02 478 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 ZNF735P0CB33 412 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 ZNRF1Q8ND25 227 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 GPR146Q96CH1 333 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 TLNRD1Q9H1K6 362 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 C2orf16Q68DN1 1984 aa12.82□□□□□ -0.36
CUX1-214ENST00000550008 IGKV1-12A0A0C4DH73 117 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 C7orf77A4D0Y5 90 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 H0YL77 283 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 ZNF737O75373 536 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 IGKV1D-12P01611 117 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 MBP02144 154 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 SULT1A1P50225 295 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 FAM27E3Q08E93 113 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 P2RY6Q15077 328 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 MYPOPQ86VE0 399 aaPredicted RBP12.81□□□□□ -0.36
CUX1-214ENST00000550008 PUSL1Q8N0Z8 303 aaKnown RBP12.81□□□□□ -0.36
CUX1-214ENST00000550008 OR8G5Q8NG78 346 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 AP1S3Q96PC3 154 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 LY6G6EA0A0G2JKS1 128 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 AHRRA9YTQ3 701 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 CHRNA7P36544 502 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 NABP1Q96AH0 204 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 U3KQA8 63 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 CECR9P0C854 216 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 PSG7Q13046 419 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 BTNL8Q6UX41 500 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 OR5D13Q8NGL4 314 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 OR5P3Q8WZ94 311 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 MYOZ1Q9NP98 299 aaPredicted RBP12.81□□□□□ -0.36
CUX1-214ENST00000550008 NOTCH2Q04721 2471 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 RNF222A6NCQ9 220 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 OPRK1P41145 380 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 ACSM6Q6P461 480 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 WDFY1Q8IWB7 410 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 WBP1Q96G27 269 aa12.81□□□□□ -0.36
CUX1-214ENST00000550008 MED13Q9UHV7 2174 aa12.8□□□□□ -0.36
CUX1-214ENST00000550008 E9PLN8 166 aa12.8□□□□□ -0.36
CUX1-214ENST00000550008 SCGB2A1O75556 95 aa12.8□□□□□ -0.36
CUX1-214ENST00000550008 OR10J4P0C629 311 aa12.8□□□□□ -0.36
CUX1-214ENST00000550008 CD200P41217 278 aa12.8□□□□□ -0.36
CUX1-214ENST00000550008 TMEM187Q14656 261 aa12.8□□□□□ -0.36
CUX1-214ENST00000550008 ABLIM2Q6H8Q1 611 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms